GOLD,GOLD,GOLD,GOLD,GOLD,GOLD,GOLD,GOLD,GOLD,GOLD,Genomes,OnLine,Database,,GOLD,,v.4:,status,genomic,metagenomic,projects,associated,metadata,Genomes,OnLine,Database,,GOLD,,http://www.genomesonline.org/,,comprehensive,resource,centralized,monitoring,genome,metagenome,projects,worldwide,complete,ongoing,projects,,along,associated,metadata,,can,accessed,GOLD,precomputed,tables,search,page,September,2011,,GOLD,,now,version,4.0,,contains,information,11,472,sequencing,projects,,2907,completed,sequence,data,deposited,public,repository,complete,projects,,1918,finished,989,permanent,drafts,Moreover,,GOLD,contains,information,340,metagenome,studies,associated,1927,metagenome,samples,GOLD,continues,expand,,moving,toward,goal,providing,comprehensive,repository,metadata,information,related,projects,organisms/environments,accordance,Minimum,Information,,x,,Sequence,specification,beyond,Genomes,Line,Database,,GOLD,,2009:,status,genomic,metagenomic,projects,associated,metadata,Genomes,Line,Database,,GOLD,,comprehensive,resource,centralized,monitoring,genome,metagenome,projects,worldwide,complete,ongoing,projects,,along,associated,metadata,,can,accessed,GOLD,precomputed,tables,search,page,September,2009,,GOLD,contains,information,5800,sequencing,projects,,1100,completed,sequence,data,deposited,public,repository,GOLD,continues,expand,,moving,toward,goal,providing,comprehensive,repository,metadata,information,related,projects,organisms/environments,accordance,Minimum,Information,,Meta,Genome,Sequence,,MIGS/MIMS,,specification,GOLD,available,at:,http://www.genomesonline.org,mirror,site,Institute,Molecular,Biology,Biotechnology,,Crete,,Greece,,at:,http://gold.imbb.forth.gr/,Genomes,Line,Database,,GOLD,,2007:,status,genomic,metagenomic,projects,associated,metadata,Genomes,Line,Database,,GOLD,,comprehensive,resource,provides,information,genome,metagenome,projects,worldwide,Complete,ongoing,projects,associated,metadata,can,accessed,GOLD,pre-computed,lists,search,page,September,2007,,GOLD,contains,information,2900,sequencing,projects,,639,completed,sequence,data,deposited,public,databases,GOLD,continues,expand,goal,providing,metadata,information,related,projects,organisms/environments,towards,Minimum,Information,Genome,Sequence',,MIGS,,guideline,GOLD,available,http://www.genomesonline.org,mirror,site,Institute,Molecular,Biology,Biotechnology,,Crete,,Greece,http://gold.imbb.forth.gr/,Genomes,Line,Database,,GOLD,,v.2:,monitor,genome,projects,worldwide,Genomes,Line,Database,,GOLD,,web,resource,comprehensive,access,information,regarding,complete,ongoing,genome,sequencing,projects,worldwide,database,currently,incorporates,information,1500,sequencing,projects,,294,completed,data,deposited,public,databases,GOLD,v.2,expanded,provide,information,related,organism,properties,phenotype,,ecotype,disease,Furthermore,,project,relevance,availability,information,now,included,GOLD,available,http://www.genomesonline.org,also,mirrored,Institute,Molecular,Biology,Biotechnology,,Crete,,Greece,http://gold.imbb.forth.gr/,Genomes,OnLine,Database,,GOLD,,v.5:,metadata,management,system,based,four,level,,meta,genome,project,classification,Genomes,OnLine,Database,,GOLD;,http://www.genomesonline.org,,comprehensive,online,resource,catalog,monitor,genetic,studies,worldwide,GOLD,provides,up-to-date,status,complete,ongoing,sequencing,projects,along,broad,array,curated,metadata,report,version,5,,v.5,,database,newly,designed,database,schema,web,user,interface,supports,several,new,features,including,implementation,four,level,,meta,genome,project,classification,system,simplified,intuitive,web,interface,access,reports,launch,search,tools,database,currently,hosts,information,19,200,studies,,56,000,Biosamples,,56,000,sequencing,projects,39,400,analysis,projects,just,catalog,worldwide,genome,projects,,GOLD,manually,curated,,quality-controlled,metadata,warehouse,problems,encountered,integrating,disparate,varying,quality,data,GOLD,briefly,highlighted,GOLD,fully,supports,follows,Genomic,Standards,Consortium,,GSC,,Minimum,Information,standards,Published,Oxford,University,Press,behalf,Nucleic,Acids,Research,2014,work,written,,,US,Government,employee,s,,public,domain,US,Genomes,OnLine,Database,,GOLD,,v.6:,data,updates,feature,enhancements,Genomes,Online,Database,,GOLD,,,https://gold.jgi.doe.gov,,manually,curated,data,management,system,catalogs,sequencing,projects,associated,metadata,around,world,current,version,GOLD,,v.6,,,projects,organized,based,four,level,classification,system,form,Study,,Organism,,isolates,,Biosample,,environmental,samples,,,Sequencing,Project,Analysis,Project,Currently,,GOLD,provides,information,26,117,Studies,,239,100,Organisms,,15,887,Biosamples,,97,212,Sequencing,Projects,78,579,Analysis,Projects,integrated,312,metadata,fields,58,controlled,vocabularies,2067,terms,web,interface,facilitates,submission,diverse,range,Sequencing,Projects,,isolate,genome,,single-cell,genome,,metagenome,,metatranscriptome,,complex,Analysis,Projects,,genome,metagenome,,combined,assembly,multiple,Sequencing,Projects,,GOLD,provides,seamless,interface,Integrated,Microbial,Genomes,,IMG,,system,supports,promotes,Genomic,Standards,Consortium,,GSC,,Minimum,Information,standards,paper,describes,data,updates,additional,features,added,last,two,years,Published,Oxford,University,Press,behalf,Nucleic,Acids,Research,2016,work,written,,,US,Government,employee,s,,public,domain,US.Genomes,OnLine,Database,,GOLD,:,monitor,genome,projects,world-wide,GOLD,comprehensive,resource,accessing,information,related,completed,ongoing,genome,projects,world-wide,database,currently,provides,information,350,genome,projects,,48,completely,sequenced,analysis,published,GOLD,created,1997,since,April,2000,licensed,Integrated,Genomics,database,freely,available,URL:,http://igweb.integratedgenomics.com/GOLD/.
Genomes,OnLine,database,,GOLD,,v.7:,updates,new,features,Genomes,Online,Database,,GOLD,,,https://gold.jgi.doe.gov,,open,online,resource,,maintains,up-to-date,catalog,genome,metagenome,projects,context,comprehensive,list,associated,metadata,Information,GOLD,organized,four,levels:,Study,,Biosample/Organism,,Sequencing,Project,Analysis,Project,Currently,GOLD,hosts,information,33,415,Studies,,49 826,Biosamples,,313 324,Organisms,,215 881,Sequencing,Projects,174 454,Analysis,Projects,total,541,metadata,fields,,80,based,controlled,vocabulary,,CV,,terms,GOLD,provides,user-friendly,web,interface,browse,sequencing,projects,launch,advanced,search,tools,across,four,classification,levels,Users,submit,metadata,wide,range,Sequencing,Analysis,Projects,GOLD,depositing,sequence,data,Integrated,Microbial,Genomes,,IMG,,system,analysis,GOLD,conforms,supports,rules,set,Genomic,Standards,Consortium,,GSC,,Minimum,Information,standards,current,version,GOLD,,v.7,,seen,number,projects,associated,metadata,increase,exponentially,years,paper,provides,update,current,status,GOLD,highlights,new,features,added,last,two,years.
Genomes,OnLine,Database,,GOLD,,v.8:,overview,updates,Genomes,OnLine,Database,,GOLD,,,https://gold.jgi.doe.gov/,,manually,curated,,daily,updated,collection,genome,projects,metadata,accumulated,around,world,current,version,database,includes,1.17,million,entries,organized,broadly,Studies,,45,770,,,Organisms,,387,382,,Biosamples,,101,207,,,Sequencing,Projects,,355,364,,Analysis,Projects,,283,481,,four,levels,contain,600,metadata,fields,,includes,76,controlled,vocabulary,,CV,,tables,containing,3873,terms,GOLD,provides,interactive,web,user,interface,browsing,searching,wide,range,project,metadata,fields,Users,can,enter,details,projects,GOLD,,acts,gatekeeper,ensure,metadata,accurately,documented,submitting,sequence,information,Integrated,Microbial,Genomes,,IMG,,system,analysis,order,maintain,reference,dataset,use,members,scientific,community,,GOLD,also,imports,projects,public,repositories,GenBank,SRA,current,status,database,,along,recent,updates,improvements,described,manuscript.
Genomes,OnLine,Database,,GOLD,,v.10:,new,features,updates,Genomes,OnLine,Database,,GOLD;,https://gold.jgi.doe.gov/,,Department,Energy,Joint,Genome,Institute,comprehensive,online,metadata,repository,designed,catalog,manage,information,related,,meta,genomic,sequence,projects,GOLD,provides,centralized,platform,researchers,can,access,wide,array,metadata,four,organization,levels,namely,Study,,Organism/Biosample,,Sequencing,Project,Analysis,Project,GOLD,continues,serve,valuable,resource,seen,significant,growth,expansion,since,inception,1997,expanded,role,collaborative,platform,,actively,imports,data,primary,repositories,like,National,Center,Biotechnology,Information,also,supports,contributions,researchers,worldwide,collaborative,approach,enriched,database,diverse,datasets,,creating,integrated,resource,enhance,scientific,insights,genomic,research,becomes,increasingly,integral,various,scientific,disciplines,,researchers,institutions,turning,GOLD,metadata,needs,meet,growing,demand,,GOLD,expanded,adding,diverse,metadata,fields,,intuitive,features,,advanced,search,capabilities,enhanced,data,visualization,tools,,making,easier,users,find,interpret,relevant,information,manuscript,provides,update,highlights,new,features,introduced,last,2,years.
,Genomes,OnLine,Database,,GOLD,,v.4:,status,genomic,metagenomic,projects,associated,metadata,Genomes,OnLine,Database,,GOLD,,http://www.genomesonline.org/,,comprehensive,resource,centralized,monitoring,genome,metagenome,projects,worldwide,complete,ongoing,projects,,along,associated,metadata,,can,accessed,GOLD,precomputed,tables,search,page,September,2011,,GOLD,,now,version,4.0,,contains,information,11,472,sequencing,projects,,2907,completed,sequence,data,deposited,public,repository,complete,projects,,1918,finished,989,permanent,drafts,Moreover,,GOLD,contains,information,340,metagenome,studies,associated,1927,metagenome,samples,GOLD,continues,expand,,moving,toward,goal,providing,comprehensive,repository,metadata,information,related,projects,organisms/environments,accordance,Minimum,Information,,x,,Sequence,specification,beyond,Genomes,Line,Database,,GOLD,,2009:,status,genomic,metagenomic,projects,associated,metadata,Genomes,Line,Database,,GOLD,,comprehensive,resource,centralized,monitoring,genome,metagenome,projects,worldwide,complete,ongoing,projects,,along,associated,metadata,,can,accessed,GOLD,precomputed,tables,search,page,September,2009,,GOLD,contains,information,5800,sequencing,projects,,1100,completed,sequence,data,deposited,public,repository,GOLD,continues,expand,,moving,toward,goal,providing,comprehensive,repository,metadata,information,related,projects,organisms/environments,accordance,Minimum,Information,,Meta,Genome,Sequence,,MIGS/MIMS,,specification,GOLD,available,at:,http://www.genomesonline.org,mirror,site,Institute,Molecular,Biology,Biotechnology,,Crete,,Greece,,at:,http://gold.imbb.forth.gr/,Genomes,Line,Database,,GOLD,,2007:,status,genomic,metagenomic,projects,associated,metadata,Genomes,Line,Database,,GOLD,,comprehensive,resource,provides,information,genome,metagenome,projects,worldwide,Complete,ongoing,projects,associated,metadata,can,accessed,GOLD,pre-computed,lists,search,page,September,2007,,GOLD,contains,information,2900,sequencing,projects,,639,completed,sequence,data,deposited,public,databases,GOLD,continues,expand,goal,providing,metadata,information,related,projects,organisms/environments,towards,Minimum,Information,Genome,Sequence',,MIGS,,guideline,GOLD,available,http://www.genomesonline.org,mirror,site,Institute,Molecular,Biology,Biotechnology,,Crete,,Greece,http://gold.imbb.forth.gr/,Genomes,Line,Database,,GOLD,,v.2:,monitor,genome,projects,worldwide,Genomes,Line,Database,,GOLD,,web,resource,comprehensive,access,information,regarding,complete,ongoing,genome,sequencing,projects,worldwide,database,currently,incorporates,information,1500,sequencing,projects,,294,completed,data,deposited,public,databases,GOLD,v.2,expanded,provide,information,related,organism,properties,phenotype,,ecotype,disease,Furthermore,,project,relevance,availability,information,now,included,GOLD,available,http://www.genomesonline.org,also,mirrored,Institute,Molecular,Biology,Biotechnology,,Crete,,Greece,http://gold.imbb.forth.gr/,Genomes,OnLine,Database,,GOLD,,v.5:,metadata,management,system,based,four,level,,meta,genome,project,classification,Genomes,OnLine,Database,,GOLD;,http://www.genomesonline.org,,comprehensive,online,resource,catalog,monitor,genetic,studies,worldwide,GOLD,provides,up-to-date,status,complete,ongoing,sequencing,projects,along,broad,array,curated,metadata,report,version,5,,v.5,,database,newly,designed,database,schema,web,user,interface,supports,several,new,features,including,implementation,four,level,,meta,genome,project,classification,system,simplified,intuitive,web,interface,access,reports,launch,search,tools,database,currently,hosts,information,19,200,studies,,56,000,Biosamples,,56,000,sequencing,projects,39,400,analysis,projects,just,catalog,worldwide,genome,projects,,GOLD,manually,curated,,quality-controlled,metadata,warehouse,problems,encountered,integrating,disparate,varying,quality,data,GOLD,briefly,highlighted,GOLD,fully,supports,follows,Genomic,Standards,Consortium,,GSC,,Minimum,Information,standards,Published,Oxford,University,Press,behalf,Nucleic,Acids,Research,2014,work,written,,,US,Government,employee,s,,public,domain,US,Genomes,OnLine,Database,,GOLD,,v.6:,data,updates,feature,enhancements,Genomes,Online,Database,,GOLD,,,https://gold.jgi.doe.gov,,manually,curated,data,management,system,catalogs,sequencing,projects,associated,metadata,around,world,current,version,GOLD,,v.6,,,projects,organized,based,four,level,classification,system,form,Study,,Organism,,isolates,,Biosample,,environmental,samples,,,Sequencing,Project,Analysis,Project,Currently,,GOLD,provides,information,26,117,Studies,,239,100,Organisms,,15,887,Biosamples,,97,212,Sequencing,Projects,78,579,Analysis,Projects,integrated,312,metadata,fields,58,controlled,vocabularies,2067,terms,web,interface,facilitates,submission,diverse,range,Sequencing,Projects,,isolate,genome,,single-cell,genome,,metagenome,,metatranscriptome,,complex,Analysis,Projects,,genome,metagenome,,combined,assembly,multiple,Sequencing,Projects,,GOLD,provides,seamless,interface,Integrated,Microbial,Genomes,,IMG,,system,supports,promotes,Genomic,Standards,Consortium,,GSC,,Minimum,Information,standards,paper,describes,data,updates,additional,features,added,last,two,years,Published,Oxford,University,Press,behalf,Nucleic,Acids,Research,2016,work,written,,,US,Government,employee,s,,public,domain,US.Genomes,OnLine,Database,,GOLD,:,monitor,genome,projects,world-wide,GOLD,comprehensive,resource,accessing,information,related,completed,ongoing,genome,projects,world-wide,database,currently,provides,information,350,genome,projects,,48,completely,sequenced,analysis,published,GOLD,created,1997,since,April,2000,licensed,Integrated,Genomics,database,freely,available,URL:,http://igweb.integratedgenomics.com/GOLD/.
Genomes,OnLine,database,,GOLD,,v.7:,updates,new,features,Genomes,Online,Database,,GOLD,,,https://gold.jgi.doe.gov,,open,online,resource,,maintains,up-to-date,catalog,genome,metagenome,projects,context,comprehensive,list,associated,metadata,Information,GOLD,organized,four,levels:,Study,,Biosample/Organism,,Sequencing,Project,Analysis,Project,Currently,GOLD,hosts,information,33,415,Studies,,49 826,Biosamples,,313 324,Organisms,,215 881,Sequencing,Projects,174 454,Analysis,Projects,total,541,metadata,fields,,80,based,controlled,vocabulary,,CV,,terms,GOLD,provides,user-friendly,web,interface,browse,sequencing,projects,launch,advanced,search,tools,across,four,classification,levels,Users,submit,metadata,wide,range,Sequencing,Analysis,Projects,GOLD,depositing,sequence,data,Integrated,Microbial,Genomes,,IMG,,system,analysis,GOLD,conforms,supports,rules,set,Genomic,Standards,Consortium,,GSC,,Minimum,Information,standards,current,version,GOLD,,v.7,,seen,number,projects,associated,metadata,increase,exponentially,years,paper,provides,update,current,status,GOLD,highlights,new,features,added,last,two,years.
Genomes,OnLine,Database,,GOLD,,v.8:,overview,updates,Genomes,OnLine,Database,,GOLD,,,https://gold.jgi.doe.gov/,,manually,curated,,daily,updated,collection,genome,projects,metadata,accumulated,around,world,current,version,database,includes,1.17,million,entries,organized,broadly,Studies,,45,770,,,Organisms,,387,382,,Biosamples,,101,207,,,Sequencing,Projects,,355,364,,Analysis,Projects,,283,481,,four,levels,contain,600,metadata,fields,,includes,76,controlled,vocabulary,,CV,,tables,containing,3873,terms,GOLD,provides,interactive,web,user,interface,browsing,searching,wide,range,project,metadata,fields,Users,can,enter,details,projects,GOLD,,acts,gatekeeper,ensure,metadata,accurately,documented,submitting,sequence,information,Integrated,Microbial,Genomes,,IMG,,system,analysis,order,maintain,reference,dataset,use,members,scientific,community,,GOLD,also,imports,projects,public,repositories,GenBank,SRA,current,status,database,,along,recent,updates,improvements,described,manuscript.
Genomes,OnLine,Database,,GOLD,,v.10:,new,features,updates,Genomes,OnLine,Database,,GOLD;,https://gold.jgi.doe.gov/,,Department,Energy,Joint,Genome,Institute,comprehensive,online,metadata,repository,designed,catalog,manage,information,related,,meta,genomic,sequence,projects,GOLD,provides,centralized,platform,researchers,can,access,wide,array,metadata,four,organization,levels,namely,Study,,Organism/Biosample,,Sequencing,Project,Analysis,Project,GOLD,continues,serve,valuable,resource,seen,significant,growth,expansion,since,inception,1997,expanded,role,collaborative,platform,,actively,imports,data,primary,repositories,like,National,Center,Biotechnology,Information,also,supports,contributions,researchers,worldwide,collaborative,approach,enriched,database,diverse,datasets,,creating,integrated,resource,enhance,scientific,insights,genomic,research,becomes,increasingly,integral,various,scientific,disciplines,,researchers,institutions,turning,GOLD,metadata,needs,meet,growing,demand,,GOLD,expanded,adding,diverse,metadata,fields,,intuitive,features,,advanced,search,capabilities,enhanced,data,visualization,tools,,making,easier,users,find,interpret,relevant,information,manuscript,provides,update,highlights,new,features,introduced,last,2,years.