PLEXdb,PLEXdb,PLEXdb,PLEXdb,PLEXdb,PLEXdb,PLEXdb,PLEXdb,PLEXdb,PLEXdb,PLEXdb:,gene,expression,resources,plants,plant,pathogens,PLEXdb,,http://www.plexdb.org,,,partnership,community,databases,,supports,comparisons,gene,expression,across,multiple,plant,pathogen,species,,promoting,individuals,and/or,consortia,upload,genome-scale,data,sets,contrast,previously,archived,data,analyses,facilitate,interpretation,structure,,function,regulation,genes,economically,important,plants,list,Gene,Atlas,experiments,highlights,data,sets,give,responses,across,different,developmental,stages,,conditions,tissues,Tools,PLEXdb,allow,users,perform,complex,analyses,quickly,easily,Model,Genome,Interrogator,,MGI,,tool,supports,mapping,gene,lists,onto,corresponding,genes,model,plant,organisms,,including,rice,Arabidopsis,MGI,predicts,homologies,,displays,gene,structures,supporting,information,annotated,genes,full-length,cDNAs,gene,list-processing,wizard,guides,users,PLEXdb,functions,creating,,analyzing,,annotating,managing,gene,lists,Users,can,upload,lists,create,output,PLEXdb,tools,,apply,diverse,higher,level,analyses,,ANOVA,clustering,PLEXdb,also,provides,methods,users,track,gene,expression,changes,across,many,different,experiments,using,Gene,OscilloScope,tool,can,identify,interesting,expression,patterns,,up-regulation,diverse,conditions,checking,gene's,suitability,steady-state,control,Development,Fusarium,graminearum,Affymetrix,GeneChip,profiling,fungal,gene,expression,vitro,planta,Recently,genome,sequences,several,filamentous,fungi,become,available,,providing,opportunity,large-scale,functional,analysis,including,genome-wide,expression,analysis,report,design,validation,first,Affymetrix,GeneChip,microarray,based,entire,genome,filamentous,fungus,,ascomycetous,plant,pathogen,Fusarium,graminearum,maximize,likelihood,representing,putative,genes,,approximately,14,000,,array,,two,distinct,sets,automatically,predicted,gene,calls,used,integrated,online,F,graminearum,Genome,DataBase,gene,sets,,subset,calls,manually,annotated,non-redundant,extract,calls,together,additional,EST,sequences,controls,submitted,GeneChip,design,Experiments,conducted,test,performance,F,graminearum,GeneChip,Hybridization,experiments,using,genomic,DNA,demonstrated,usefulness,array,experimentation,F,graminearum,least,four,additional,pathogenic,Fusarium,species,Differential,transcript,accumulation,detected,using,F,graminearum,GeneChip,treatments,derived,fungus,grown,culture,three,nutritional,regimes,comparison,fungal,growth,infected,barley,ability,detect,fungal,genes,planta,surprisingly,sensitive,even,without,efforts,enrich,fungal,transcripts,Plant,Expression,Database,,PLEXdb,,http://www.plexdb.org,,will,used,public,repository,raw,normalized,expression,data,F,graminearum,GeneChip,F,graminearum,GeneChip,will,help,accelerate,exploration,pathogen-host,pathways,may,involve,interactions,pathogenicity,genes,fungus,disease,response,plant.<br>,PLEXdb:,gene,expression,resources,plants,plant,pathogens,PLEXdb,,http://www.plexdb.org,,,partnership,community,databases,,supports,comparisons,gene,expression,across,multiple,plant,pathogen,species,,promoting,individuals,and/or,consortia,upload,genome-scale,data,sets,contrast,previously,archived,data,analyses,facilitate,interpretation,structure,,function,regulation,genes,economically,important,plants,list,Gene,Atlas,experiments,highlights,data,sets,give,responses,across,different,developmental,stages,,conditions,tissues,Tools,PLEXdb,allow,users,perform,complex,analyses,quickly,easily,Model,Genome,Interrogator,,MGI,,tool,supports,mapping,gene,lists,onto,corresponding,genes,model,plant,organisms,,including,rice,Arabidopsis,MGI,predicts,homologies,,displays,gene,structures,supporting,information,annotated,genes,full-length,cDNAs,gene,list-processing,wizard,guides,users,PLEXdb,functions,creating,,analyzing,,annotating,managing,gene,lists,Users,can,upload,lists,create,output,PLEXdb,tools,,apply,diverse,higher,level,analyses,,ANOVA,clustering,PLEXdb,also,provides,methods,users,track,gene,expression,changes,across,many,different,experiments,using,Gene,OscilloScope,tool,can,identify,interesting,expression,patterns,,up-regulation,diverse,conditions,checking,gene's,suitability,steady-state,control,Development,Fusarium,graminearum,Affymetrix,GeneChip,profiling,fungal,gene,expression,vitro,planta,Recently,genome,sequences,several,filamentous,fungi,become,available,,providing,opportunity,large-scale,functional,analysis,including,genome-wide,expression,analysis,report,design,validation,first,Affymetrix,GeneChip,microarray,based,entire,genome,filamentous,fungus,,ascomycetous,plant,pathogen,Fusarium,graminearum,maximize,likelihood,representing,putative,genes,,approximately,14,000,,array,,two,distinct,sets,automatically,predicted,gene,calls,used,integrated,online,F,graminearum,Genome,DataBase,gene,sets,,subset,calls,manually,annotated,non-redundant,extract,calls,together,additional,EST,sequences,controls,submitted,GeneChip,design,Experiments,conducted,test,performance,F,graminearum,GeneChip,Hybridization,experiments,using,genomic,DNA,demonstrated,usefulness,array,experimentation,F,graminearum,least,four,additional,pathogenic,Fusarium,species,Differential,transcript,accumulation,detected,using,F,graminearum,GeneChip,treatments,derived,fungus,grown,culture,three,nutritional,regimes,comparison,fungal,growth,infected,barley,ability,detect,fungal,genes,planta,surprisingly,sensitive,even,without,efforts,enrich,fungal,transcripts,Plant,Expression,Database,,PLEXdb,,http://www.plexdb.org,,will,used,public,repository,raw,normalized,expression,data,F,graminearum,GeneChip,F,graminearum,GeneChip,will,help,accelerate,exploration,pathogen-host,pathways,may,involve,interactions,pathogenicity,genes,fungus,disease,response,plant.<br>