ASmiR,ASmiR,ASmiR,ASmiR,ASmiR,ASmiR,ASmiR,ASmiR,ASmiR,ASmiR,interplay,microRNA,alternative,splicing,linear,circular,RNAs,eleven,plant,species,MOTIVATION:,MicroRNA,,miRNA,,alternative,splicing,,AS,-mediated,post-transcriptional,regulation,extensively,studied,eukaryotes,However,,interplay,AS,miRNAs,explored,plants,knowledge,,overall,profile,miRNA,target,sites,circular,RNAs,,circRNA,,generated,alternative,back,splicing,never,reported,previously,address,challenge,,identified,miRNA,target,sites,located,alternatively,spliced,regions,linear,circular,splice,isoforms,using,up-to-date,single-molecule,real-time,,SMRT,,isoform,sequencing,,Iso-Seq,,Illumina,sequencing,data,eleven,plant,species.<br>RESULTS:,total,,identified,399 401,114 574,AS,events,linear,circular,RNAs,,respectively,Among,,64 781,41 146,miRNA,target,sites,located,linear,circular,AS,region,,respectively,addition,,found,38 913,circRNAs,overlapping,45 648,AS,events,parent,isoforms,,suggesting,circRNA,regulation,AS,linear,RNAs,forming,R-loop,genomic,locus,,present,comprehensive,database,miRNA,targets,alternatively,spliced,linear,circRNAs,,ASmiR,,web,server,deposition,identification,miRNA,target,sites,located,alternatively,spliced,region,linear,circular,RNAs,database,accompanied,easy-to-use,web,query,interface,meaningful,downstream,analysis,Plant,research,community,can,submit,user-defined,datasets,web,service,search,AS,regions,harboring,small,RNA,target,sites,conclusion,,study,provides,unprecedented,resource,understand,regulatory,relationships,miRNAs,AS,gymnosperms,angiosperms.<br>AVAILABILITY,AND,IMPLEMENTATION:,readily,accessible,database,web-based,tools,available,http://forestry.fafu.edu.cn/bioinfor/db/ASmiR.<br>SUPPLEMENTARY,INFORMATION:,Supplementary,data,available,Bioinformatics,online.<br>,interplay,microRNA,alternative,splicing,linear,circular,RNAs,eleven,plant,species,MOTIVATION:,MicroRNA,,miRNA,,alternative,splicing,,AS,-mediated,post-transcriptional,regulation,extensively,studied,eukaryotes,However,,interplay,AS,miRNAs,explored,plants,knowledge,,overall,profile,miRNA,target,sites,circular,RNAs,,circRNA,,generated,alternative,back,splicing,never,reported,previously,address,challenge,,identified,miRNA,target,sites,located,alternatively,spliced,regions,linear,circular,splice,isoforms,using,up-to-date,single-molecule,real-time,,SMRT,,isoform,sequencing,,Iso-Seq,,Illumina,sequencing,data,eleven,plant,species.<br>RESULTS:,total,,identified,399 401,114 574,AS,events,linear,circular,RNAs,,respectively,Among,,64 781,41 146,miRNA,target,sites,located,linear,circular,AS,region,,respectively,addition,,found,38 913,circRNAs,overlapping,45 648,AS,events,parent,isoforms,,suggesting,circRNA,regulation,AS,linear,RNAs,forming,R-loop,genomic,locus,,present,comprehensive,database,miRNA,targets,alternatively,spliced,linear,circRNAs,,ASmiR,,web,server,deposition,identification,miRNA,target,sites,located,alternatively,spliced,region,linear,circular,RNAs,database,accompanied,easy-to-use,web,query,interface,meaningful,downstream,analysis,Plant,research,community,can,submit,user-defined,datasets,web,service,search,AS,regions,harboring,small,RNA,target,sites,conclusion,,study,provides,unprecedented,resource,understand,regulatory,relationships,miRNAs,AS,gymnosperms,angiosperms.<br>AVAILABILITY,AND,IMPLEMENTATION:,readily,accessible,database,web-based,tools,available,http://forestry.fafu.edu.cn/bioinfor/db/ASmiR.<br>SUPPLEMENTARY,INFORMATION:,Supplementary,data,available,Bioinformatics,online.<br>