OGA2,OGA2,OGA2,OGA2,OGA2,OGA2,OGA2,OGA2,OGA2,OGA2,Ocean,Gene,Atlas,v2.0:,online,exploration,biogeography,phylogeny,plankton,genes,Testing,hypothesis,biogeography,genes,using,large,data,resources,Tara,Oceans,marine,metagenomes,metatranscriptomes,requires,significant,hardware,resources,programming,skills,new,release,'Ocean,Gene,Atlas',,OGA2,,freely,available,intuitive,online,service,mine,large,complex,marine,environmental,genomic,databases,OGA2,datasets,available,extended,now,include,,Tara,Oceans,portfolio:,,,eukaryotic,Metagenome-Assembled-Genomes,,MAGs,,Single-cell,Assembled,Genomes,,SAGs,,,10.2E+6,coding,genes,,,,ii,,version,2,Ocean,Microbial,Reference,Gene,Catalogue,,46.8E+6,non-redundant,genes,,,,iii,,924,MetaGenomic,Transcriptomes,,7E+6,unigenes,,,,iv,,530,MAGs,Arctic,MAG,catalogue,,1E+6,genes,,,v,,1888,Bacterial,Archaeal,Genomes,,4.5E+6,genes,,,additional,dataset,Malaspina,2010,global,circumnavigation:,,vi,,317,Malaspina,Deep,Metagenome,Assembled,Genomes,,0.9E+6,genes,,Novel,analyses,enabled,OGA2,include,phylogenetic,tree,inference,visualize,user,queries,within,context,sequence,homologues,marine,environmental,dataset,RefSeq,database,Application,Programming,Interface,,API,,now,allows,users,query,OGA2,using,command-line,tools,,hence,providing,local,workflow,integration,Finally,,gene,abundance,can,interactively,filtered,directly,map,displays,using,available,environmental,variables,Ocean,Gene,Atlas,v2.0,freely-available,at:,https://tara-oceans.mio.osupytheas.fr/ocean-gene-atlas/.
The,Ocean,Gene,Atlas:,exploring,biogeography,plankton,genes,online,Ocean,Gene,Atlas,web,service,explore,biogeography,genes,marine,planktonic,organisms,allows,users,query,protein,nucleotide,sequences,global,ocean,reference,gene,catalogs,just,one,click,,abundance,location,target,sequences,visualized,world,maps,well,taxonomic,distribution,Interactive,results,panels,allow,adjusting,cutoffs,alignment,quality,displaying,abundances,genes,context,environmental,features,,temperature,,nutrients,,etc.,,measured,time,sampling,ease,use,enables,non-bioinformaticians,explore,quantitative,contextualized,information,genes,interest,global,ocean,ecosystem,Currently,Ocean,Gene,Atlas,deployed,,,Ocean,Microbial,Reference,Gene,Catalog,,OM-RGC,,comprising,40,million,non-redundant,mostly,prokaryotic,gene,sequences,associated,Tara,Oceans,Global,Ocean,Sampling,,GOS,,gene,abundances,,ii,,Marine,Atlas,Tara,Ocean,Unigenes,,MATOU,,composed,>116,million,eukaryote,unigenes,Additional,datasets,will,added,upon,availability,marine,environmental,datasets,provide,required,complement,sequence,assemblies,,raw,reads,contextual,environmental,parameters,Ocean,Gene,Atlas,freely-available,web,service,at:,http://tara-oceans.mio.osupytheas.fr/ocean-gene-atlas/.,Ocean,Gene,Atlas,v2.0:,online,exploration,biogeography,phylogeny,plankton,genes,Testing,hypothesis,biogeography,genes,using,large,data,resources,Tara,Oceans,marine,metagenomes,metatranscriptomes,requires,significant,hardware,resources,programming,skills,new,release,'Ocean,Gene,Atlas',,OGA2,,freely,available,intuitive,online,service,mine,large,complex,marine,environmental,genomic,databases,OGA2,datasets,available,extended,now,include,,Tara,Oceans,portfolio:,,,eukaryotic,Metagenome-Assembled-Genomes,,MAGs,,Single-cell,Assembled,Genomes,,SAGs,,,10.2E+6,coding,genes,,,,ii,,version,2,Ocean,Microbial,Reference,Gene,Catalogue,,46.8E+6,non-redundant,genes,,,,iii,,924,MetaGenomic,Transcriptomes,,7E+6,unigenes,,,,iv,,530,MAGs,Arctic,MAG,catalogue,,1E+6,genes,,,v,,1888,Bacterial,Archaeal,Genomes,,4.5E+6,genes,,,additional,dataset,Malaspina,2010,global,circumnavigation:,,vi,,317,Malaspina,Deep,Metagenome,Assembled,Genomes,,0.9E+6,genes,,Novel,analyses,enabled,OGA2,include,phylogenetic,tree,inference,visualize,user,queries,within,context,sequence,homologues,marine,environmental,dataset,RefSeq,database,Application,Programming,Interface,,API,,now,allows,users,query,OGA2,using,command-line,tools,,hence,providing,local,workflow,integration,Finally,,gene,abundance,can,interactively,filtered,directly,map,displays,using,available,environmental,variables,Ocean,Gene,Atlas,v2.0,freely-available,at:,https://tara-oceans.mio.osupytheas.fr/ocean-gene-atlas/.
The,Ocean,Gene,Atlas:,exploring,biogeography,plankton,genes,online,Ocean,Gene,Atlas,web,service,explore,biogeography,genes,marine,planktonic,organisms,allows,users,query,protein,nucleotide,sequences,global,ocean,reference,gene,catalogs,just,one,click,,abundance,location,target,sequences,visualized,world,maps,well,taxonomic,distribution,Interactive,results,panels,allow,adjusting,cutoffs,alignment,quality,displaying,abundances,genes,context,environmental,features,,temperature,,nutrients,,etc.,,measured,time,sampling,ease,use,enables,non-bioinformaticians,explore,quantitative,contextualized,information,genes,interest,global,ocean,ecosystem,Currently,Ocean,Gene,Atlas,deployed,,,Ocean,Microbial,Reference,Gene,Catalog,,OM-RGC,,comprising,40,million,non-redundant,mostly,prokaryotic,gene,sequences,associated,Tara,Oceans,Global,Ocean,Sampling,,GOS,,gene,abundances,,ii,,Marine,Atlas,Tara,Ocean,Unigenes,,MATOU,,composed,>116,million,eukaryote,unigenes,Additional,datasets,will,added,upon,availability,marine,environmental,datasets,provide,required,complement,sequence,assemblies,,raw,reads,contextual,environmental,parameters,Ocean,Gene,Atlas,freely-available,web,service,at:,http://tara-oceans.mio.osupytheas.fr/ocean-gene-atlas/.