Gene Expression Nebulas
基于标准化流程分析的转录图谱综合数据库

Gene Expression Nebulas

多物种转录图谱整合数据库

Homo sapiens: ENSG00000054523

Accession ID: ENSG00000054523
来源: Ensembl
基因Symbol: KIF1B
Location: 1:10210805-10381603(+)
描述信息: kinesin family member 1B
基因Biotype: protein_coding
Band: q31.2
GC含量: 36.49
HK/TS: NA
表型: Autosomal dominant Charcot-Marie-Tooth disease type 2A1;Hereditary pheochromocytoma-paraganglioma;C
GeneCard:
Accession 转录本Symbol 染色体 起始位点 终止位点 链信息 Transcript Biotype
GO Term ID GO Term Name GO Domain GO Term定义
GO:0005524 ATP binding molecular_function Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0005515 protein binding molecular_function Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0008017 microtubule binding molecular_function Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
GO:0003777 microtubule motor activity molecular_function Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
GO:0007018 microtubule-based movement biological_process A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules.
GO:0005737 cytoplasm cellular_component All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0000166 nucleotide binding molecular_function Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0005739 mitochondrion cellular_component A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
GO:0005856 cytoskeleton cellular_component Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
GO:1904115 axon cytoplasm cellular_component Any cytoplasm that is part of a axon.
GO:0006915 apoptotic process biological_process A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.
GO:0030054 cell junction cellular_component A cellular component that forms a specialized region of connection between two or more cells, or between a cell and the extracellular matrix, or between two membrane-bound components of a cell, such as flagella.
GO:0031410 cytoplasmic vesicle cellular_component A vesicle found in the cytoplasm of a cell.
GO:0005874 microtubule cellular_component Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
GO:0030659 cytoplasmic vesicle membrane cellular_component The lipid bilayer surrounding a cytoplasmic vesicle.
GO:0016887 ATPase activity molecular_function Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
GO:0045202 synapse cellular_component The junction between an axon of one neuron and a dendrite of another neuron, a muscle fiber or a glial cell. As the axon approaches the synapse it enlarges into a specialized structure, the presynaptic terminal bouton, which contains mitochondria and synaptic vesicles. At the tip of the terminal bouton is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic terminal bouton secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.
GO:0016192 vesicle-mediated transport biological_process A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
GO:0043005 neuron projection cellular_component A prolongation or process extending from a nerve cell, e.g. an axon or dendrite.
GO:0005875 microtubule associated complex cellular_component Any multimeric complex connected to a microtubule.
GO:0030705 cytoskeleton-dependent intracellular transport biological_process The directed movement of substances along cytoskeletal fibers such as microfilaments or microtubules within a cell.
GO:0030424 axon cellular_component The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter.
GO:0030425 dendrite cellular_component A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
GO:0005871 kinesin complex cellular_component Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work.
GO:0008089 anterograde axonal transport biological_process The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons.
GO:0019894 kinesin binding molecular_function Interacting selectively and non-covalently and stoichiometrically with kinesin, a member of a superfamily of microtubule-based motor proteins that perform force-generating tasks such as organelle transport and chromosome segregation.
GO:0008021 synaptic vesicle cellular_component A secretory organelle, typically 50 nm in diameter, of presynaptic nerve terminals; accumulates in high concentrations of neurotransmitters and secretes these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane.
GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed molecular_function Catalysis of movement along a microtubule toward the plus end, coupled to the hydrolysis of ATP.
GO:0007270 neuron-neuron synaptic transmission biological_process The process of synaptic transmission from a neuron to another neuron across a synapse.
GO:0007274 neuromuscular synaptic transmission biological_process The process of synaptic transmission from a neuron to a muscle, across a synapse.
GO:0019900 kinase binding molecular_function Interacting selectively and non-covalently with a kinase, any enzyme that catalyzes the transfer of a phosphate group.
GO:0097110 scaffold protein binding molecular_function Interacting selectively and non-covalently with a scaffold protein. Scaffold proteins are crucial regulators of many key signaling pathways. Although not strictly defined in function, they are known to interact and/or bind with multiple members of a signaling pathway, tethering them into complexes.
GO:1990939 ATP-dependent microtubule motor activity molecular_function Catalysis of movement along a microtubule, coupled to the hydrolysis of ATP.
GO:0010628 positive regulation of gene expression biological_process Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
GO:0010970 transport along microtubule biological_process The movement of organelles or other particles from one location in the cell to another along microtubules, driven by motor activity.
GO:0032418 lysosome localization biological_process Any process in which a lysosome is transported to, and/or maintained in, a specific location.
GO:0047497 mitochondrion transport along microtubule biological_process The directed movement of a mitochondrion along a microtubule, mediated by motor proteins.
GO:1904647 response to rotenone biological_process Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rotenone stimulus.
GO:1990048 anterograde neuronal dense core vesicle transport biological_process The directed movement of substances in neuronal dense core vesicles along axonal microtubules towards the presynapse.
GO:1990049 retrograde neuronal dense core vesicle transport biological_process The directed movement of neuronal dense core vesicles along axonal microtubules towards the cell body.
GO:1990090 cellular response to nerve growth factor stimulus biological_process A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nerve growth factor stimulus.
GO:1990778 protein localization to cell periphery biological_process A process in which a protein is transported to, or maintained in, the cell periphery.
GO:0016020 membrane cellular_component A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0007088 regulation of mitotic nuclear division biological_process Any process that modulates the frequency, rate or extent of mitosis.
GO:0003774 motor activity molecular_function Catalysis of the generation of force resulting either in movement along a microfilament or microtubule, or in torque resulting in membrane scission, coupled to the hydrolysis of a nucleoside triphosphate.
DOID Parent DOID 疾病名称 同义词 疾病定义

GEN中的表达水平

GTEx中的表达水平

平均TPM 中位数TPM 最大值TPM 最小值TPM CV τ-Value Tissue Breadth GTEx REDIportal
23.33 14.29 109.25 3.83 0.92 0.80 53

使用JBrowse可视化显示测序覆盖水平、编辑水平以及编辑位点

数据集ID 上调/下调 log FC P-value Adj-value 平均表达量 分组比较 疾病 组织 细胞类型 细胞系 GEN样本名称