Gene Expression Nebulas
基于标准化流程分析的转录图谱综合数据库

Gene Expression Nebulas

多物种转录图谱整合数据库

PRJCA002030: Pan-Genome of Wild and Cultivated Soybeans

来源: NGDC / CRA002272
提交时间: Jan 10 2020
释放时间: Apr 08 2020
最后更新时间: -

概要: Soybean is one of the most important vegetable oil and protein feed crops. To capture the entire genomic diversity, it is needed to construct a complete high-quality pan-genome from diverse soybean accessions. In this study, we performed individual de novo genome assemblies for 26 representative soybeans that were selected from 2,898 deeply sequenced accessions. Using these assembled genomes together with three previously reported genomes, we constructed a graph-based genome and performed pan-genome analysis, which identified numerous genetic variations that cannot be detected by direct mapping of short sequence reads onto a single reference genome. The structural variations from the 2,898 accessions that were genotyped based on the graph-based genome and the RNA sequencing (RNA-seq) data from the representative 26 accessions helped to link genetic variations to candidate genes that are responsible for important traits. This pan-genome resource will promote evolutionary and functional genomics studies in soybean.

项目整体设计: RNA-seq data of 26 soybeans

GEN 数据集:
GEND000303 GEND000304
测序方法:
物种:
组织:
分离条件:
发育阶段:
方案
生长方案: All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2018.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2018.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2019.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2019.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2020.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2020.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2021.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2021.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2022.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2022.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2023.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2023.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2024.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2024.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2025.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2025.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2026.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2026.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2027.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2027.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2028.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2028.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2029.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2029.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2030.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2030.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2031.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2031.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2032.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2032.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2033.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2033.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2034.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2034.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2035.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2035.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2036.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2036.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2037.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2037.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2038.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2038.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2039.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2039.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2040.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2040.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2041.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2041.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2042.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2042.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2043.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2043.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2044.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2044.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2045.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2045.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2046.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2046.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2047.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2047.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2048.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2048.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2049.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2049.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2050.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2050.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2051.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2051.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2052.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2052.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2053.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2053.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2054.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2054.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2055.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2055.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2056.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2056.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2057.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2057.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2058.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2058.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2059.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2059.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2060.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2060.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2061.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2061.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2062.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2062.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2063.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2063.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2064.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2064.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2065.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2065.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2066.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2066.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2067.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2067.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2068.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2068.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2069.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2069.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2070.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2070.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2071.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2071.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2072.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2072.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2073.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2073.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2074.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2074.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2075.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2075.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2076.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2076.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2077.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2077.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2078.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2078.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2079.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2079.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2080.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2080.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2081.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2081.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2082.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2082.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2083.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2083.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2084.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2084.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2085.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2085.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2086.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2086.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2087.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2087.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2088.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2088.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2089.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2089.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2090.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2090.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2091.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2091.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2092.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2092.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2093.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2093.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2094.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2094.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2095.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2095.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2096.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2096.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2097.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2097.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2098.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2098.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2099.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2099.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2100.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2100.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2101.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2101.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2102.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2102.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2103.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2103.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2104.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2104.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2105.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2105.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2106.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2106.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2107.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2107.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2108.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2108.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2109.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2109.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2110.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2110.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2111.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2111.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2112.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2112.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2113.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2113.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2114.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2114.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2115.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2115.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2116.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2116.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2117.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2117.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2118.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2118.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2119.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2119.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2120.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40 ? 22 0 N and 116 ? 23 0 E) in the growth season in 2120.; All soybean accessions were planted at the Experimental Station of the Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing (40°22'N and 116°23'E) in the growth season in 2121.
处理方案: -
提取方案: Total RNA was isolated using the RNAprep Pure Plant Kit (TIANGEN).
建库方案: RNA-seq library construction was performed following the method of a previous reference (Shen et al., 2014) and sequenced on the NovaSeq platform.
测序信息
分子类型: poly(A)+ RNA
库的片段类型: PAIRED
库的链类型: -
测序平台: ILLUMINA
测序仪型号: Illumina NovaSeq 6000
链特异性: Unspecific
样本
基本信息:
样本描述:
生物条件:
实验变量:
方案:
测序信息:
质量评估:
数据来源 GEN样本编号 GEN数据集编号 系列编号 项目编号 样本编号 样本名称 生物样本编号 样本访问号 实验访问号 释放时间 提交时间 最后更新时间 物种 种族 族裔 年龄 年龄单位 性别 来源名称 组织 细胞类型 细胞亚型 细胞系 疾病 疾病状态 发育阶段 突变/变异 表型 Condition Detail 生长方案 处理方案 提取方案 建库方案 分子类型 库的片段类型 链特异性 库的链类型 加标(Spike-In) 测序方法 测序平台 测序仪型号 细胞数 测序片段数 碱基数 平均测序片段长度_1 平均测序片段长度_2 唯一比对率 多重比对率 覆盖度
文章
Pan-Genome of Wild and Cultivated Soybeans.
Cell . 2020-06-17 [PMID: 32553274]