Gene Expression Nebulas
基于标准化流程分析的转录图谱综合数据库

Gene Expression Nebulas

多物种转录图谱整合数据库

PRJNA521167: COX-2 mediates tumor-stromal Prolactin signaling to initiate tumorigenesis

来源: NCBI / GSE126158
提交时间: Feb 06 2019
释放时间: Feb 25 2019
最后更新时间: Mar 27 2019

概要: Tumor-stromal communication within the microenvironment contributes to initiation of metastasis and may present a therapeutic opportunity. Using serial single cell RNA-sequencing in an orthotopic mouse prostate cancer model, we find upregulation of Prolactin receptor as cancer cells that have disseminated to the lung expand into micrometastases. Secretion of the ligand Prolactin by adjacent lung stromal cells is induced by tumor cell production of the COX-2 synthetic product prostaglandin E-2 (PGE-2). PGE-2 treatment of fibroblasts activates the nuclear orphan receptor NR4A (Nur77), with Prolactin as a major transcriptional target for the NR4A-Retinoid X receptor (RXR) heterodimer. Ectopic expression of Prolactin receptor in mouse cancer cells enhances micrometastasis, while treatment with the COX-2 inhibitor Celecoxib abrogates Prolactin secretion by fibroblasts and reduces tumor initiation. Across multiple human cancers, COX-2, Prolactin, and Prolactin receptor show consistent differential expression in tumor and stromal compartments. Such paracrine crosstalk may thus contribute to the documented efficacy of COX-2 inhibitors in cancer suppression.

项目整体设计: We performed RNA-seq on the human dermal fibroblast cell line DF treated for six hours with PGE-2 or untreated.

GEN 数据集:
GEND000045
测序方法:
物种:
健康状况:
细胞类型:
细胞系:
方案
生长方案: -
处理方案: NT; PGE-2 six hours
提取方案: Total RNA was isolated from the cell lines using RNeasy Mini Kit (Qiagen)
建库方案: -
测序信息
分子类型: poly(A)+ RNA
库的片段类型: PAIRED
库的链类型: Forward
测序平台: ILLUMINA
测序仪型号: Illumina HiSeq 2000
链特异性: Specific
样本
基本信息:
样本描述:
生物条件:
实验变量:
方案:
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质量评估:
数据来源 GEN样本编号 GEN数据集编号 系列编号 项目编号 样本编号 样本名称 生物样本编号 样本访问号 实验访问号 释放时间 提交时间 最后更新时间 物种 种族 族裔 年龄 年龄单位 性别 来源名称 组织 细胞类型 细胞亚型 细胞系 疾病 疾病状态 发育阶段 突变/变异 表型 Condition Detail 生长方案 处理方案 提取方案 建库方案 分子类型 库的片段类型 链特异性 库的链类型 加标(Spike-In) 测序方法 测序平台 测序仪型号 细胞数 测序片段数 碱基数 平均测序片段长度_1 平均测序片段长度_2 唯一比对率 多重比对率 覆盖度
文章
COX-2 mediates tumor-stromal prolactin signaling to initiate tumorigenesis.
Proceedings of the National Academy of Sciences of the United States of America . 2019-02-28 [PMID: 30819896]