Gene Expression
Nebulas
Gene Expression Nebulas| Download | Dataset ID | BioProject ID | Project ID | Dataset Name | Species | Strategy | Sample Number | Tissue | Cell Type | Cell Line | Healthy Condition | Development Stage | Case Detail | Control Detail | Cell Number | Biological Condition | Quality and Quantity | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Baseline | Genetic | Phenotypic | Environmental | Spatial | Temporal | RNA Type | Median Mapping Quality | Median Coverage | Max Sequencing Length | Max Replicate# | ||||||||||||||||
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The Drosophila embryo at single-cell transcriptome resolution.
Karaiskos N, Wahle P, Alles J, Boltengagen A, Ayoub S, Kipar C, Kocks C, Rajewsky N, Zinzen RP.
Science. 2017-08-31; 358 (6360)
PMID: 28860209 DOI: 10.1126/science.aan3235
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Classifying Drosophila Olfactory Projection Neuron Subtypes by Single-Cell RNA Sequencing.
Li H, Horns F, Wu B, Xie Q, Li J, Li T, Luginbuhl DJ, Quake SR, Luo L.
Cell. 2017-11-01; 171 (5)
PMID: 29149607 DOI: 10.1016/j.cell.2017.10.019
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Dynamic miRNA-mRNA regulations are essential for maintaining Drosophila immune homeostasis during Micrococcus luteus infection.
Wei G, Sun L, Li R, Li L, Xu J, Ma F.
Dev Comp Immunol. 2017-12-01; 81
PMID: 29198775 DOI: 10.1016/j.dci.2017.11.019
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Single-Cell Transcriptomes Reveal Diverse Regulatory Strategies for Olfactory Receptor Expression and Axon Targeting.
Li H, Li T, Horns F, Li J, Xie Q, Xu C, Wu B, Kebschull JM, McLaughlin CN, Kolluru SS, Jones RC, Vacek D, Xie A, Luginbuhl DJ, Quake SR, Luo L.
Curr Biol. 2020-02-13; 30 (7)
PMID: 32059767 DOI: 10.1016/j.cub.2020.01.049
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Temporal evolution of single-cell transcriptomes of Drosophila olfactory projection neurons.
Xie Q, Brbic M, Horns F, Kolluru SS, Jones RC, Li J, Reddy AR, Xie A, Kohani S, Li Z, McLaughlin CN, Li T, Xu C, Vacek D, Luginbuhl DJ, Leskovec J, Quake SR, Luo L, Li H.
Elife. 2021-01-11; 10
PMID: 33427646 DOI: 10.7554/elife.63450
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Single-cell transcriptome maps of myeloid blood cell lineages in Drosophila.
Cho B, Yoon SH, Lee D, Koranteng F, Tattikota SG, Cha N, Shin M, Do H, Hu Y, Oh SY, Lee D, Vipin Menon A, Moon SJ, Perrimon N, Nam JW, Shim J.
Nat Commun. 2020-09-08; 11 (1)
PMID: 32900993 DOI: 10.1038/s41467-020-18135-y
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Cell fixation and preservation for droplet-based single-cell transcriptomics.
Alles J, Karaiskos N, Praktiknjo SD, Grosswendt S, Wahle P, Ruffault PL, Ayoub S, Schreyer L, Boltengagen A, Birchmeier C, Zinzen R, Kocks C, Rajewsky N.
BMC Biol. 2017-05-19; 15 (1)
PMID: 28526029 DOI: 10.1186/s12915-017-0383-5
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