e.g., HRA000087; HRA000150
HRA000020
Title:
Microbial shifts in prediabetes and diabetes
Release date:
2020-07-19
Description:
The link between the gut microbiota and type 2 diabetes (T2D) warrants further investigation because of known confounding effects from antidiabetic treatment. Here we profiled the gut microbiome in a discovery and validation cohort comprising Swedish subjects naive for diabetes treatment and grouped by glycemic status. We observed that overall gut microbiota composition was altered in groups with impaired glucose tolerance, combined glucose intolerance and T2D, but not in those with impaired fasting glucose.
Data Accessibility:   
Controlled access Request Data
BioProject:
Study type:
Human metagenome
Data Access Committee

For each controlled access study, there is a corresponding Data Access Committee(DAC) to determine the access permissions. Access to actual data files is not managed by NGDC.


DAC NO.:
DAC name:
IGT-Data committee
Contact person:
Backhed Fredrik
Email:
fredrik@wlab.gu.se
Description:
Data can be shared according to Swedish regulations to protect personal integrity.
Individuals & samples
Individual Accession
Individual Name
Gender
Sample Accession
Sample Name
Sample Description
Individual Accession
Individual Name
Gender
Sample Accession
Sample Name
Sample Description
HRI041024IGTR0001femaleHRS047929IGTR0001IGT_project
HRI041025IGTR0002femaleHRS047930IGTR0002IGT_project
HRI041026IGTR0004femaleHRS047931IGTR0004IGT_project
HRI041027IGTR0005maleHRS047932IGTR0005IGT_project
HRI041028IGTR0006femaleHRS047933IGTR0006IGT_project
HRI041029IGTR0007maleHRS047934IGTR0007IGT_project
HRI041030IGTR0008femaleHRS047935IGTR0008IGT_project
HRI041031IGTR0009femaleHRS047936IGTR0009IGT_project
HRI041032IGTR0011maleHRS047937IGTR0011IGT_project
HRI041033IGTR0012femaleHRS047938IGTR0012IGT_project
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Run accession
Files
Experiment
Experiment title
Platform
Sample
Run accession
Files
Experiment
Experiment title
Platform
Sample
HRR079489HRR079489_f1.fastq.gz (2.57 GB)HRX060560IGTR0001Illumina HiSeq 4000HRS047929 (SAMC1387882)
HRR079489HRR079489_r2.fastq.gz (2.86 GB)HRX060560IGTR0001Illumina HiSeq 4000HRS047929 (SAMC1387882)
HRR079490HRR079490_f1.fastq.gz (2.18 GB)HRX060561IGTR0002Illumina HiSeq 4000HRS047930 (SAMC1387887)
HRR079490HRR079490_r2.fastq.gz (2.41 GB)HRX060561IGTR0002Illumina HiSeq 4000HRS047930 (SAMC1387887)
HRR079491HRR079491_f1.fastq.gz (2.29 GB)HRX060562IGTR0004Illumina HiSeq 4000HRS047931 (SAMC1387889)
HRR079491HRR079491_r2.fastq.gz (2.51 GB)HRX060562IGTR0004Illumina HiSeq 4000HRS047931 (SAMC1387889)
HRR079492HRR079492_f1.fastq.gz (2.50 GB)HRX060563IGTR0005Illumina HiSeq 4000HRS047932 (SAMC1387893)
HRR079492HRR079492_r2.fastq.gz (2.76 GB)HRX060563IGTR0005Illumina HiSeq 4000HRS047932 (SAMC1387893)
HRR079493HRR079493_f1.fastq.gz (2.28 GB)HRX060564IGTR0006Illumina HiSeq 4000HRS047933 (SAMC1387899)
HRR079493HRR079493_r2.fastq.gz (2.53 GB)HRX060564IGTR0006Illumina HiSeq 4000HRS047933 (SAMC1387899)
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Submitter:   Bäckhed Fredrik / fredrik@wlab.gu.se
Organization:   University of Gothenburg
Submission date:   2020-06-24
Requests:   7