e.g., HRA000087; HRA000150
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HRA000437
   HRA000437.xlsx
Title:
Spatial Transcriptomes of Liver Cancer
Release date:
2021-10-29
Description:
Comphrehensive analysis of the spatial architecture of primary liver cancer. Processed data by Spatial Ranger (including images) can be assessed via: [http://lifeome.net/supp/livercancer-st/data.htm].
Data Accessibility:   
Controlled access Request Data
BioProject:
PRJCA003792
Study type:
Disease Study
Disease name:
liver cancer
Data Access Committee

For each controlled access study, there is a corresponding Data Access Committee(DAC) to determine the access permissions. Access to actual data files is not managed by NGDC.


DAC NO.:
HDAC000006
DAC name:
THU_Glab
Contact person:
Gu Jin
Email:
jgu@tsinghua.edu.cn
Description:
Bioinformatics Program from Tsinghua University
Individuals & samples
Individual Accession
Individual Name
Gender
Sample Accession
Sample Name
Sample Description
Individual Accession
Individual Name
Gender
Sample Accession
Sample Name
Sample Description
HRI077812HCC-1maleHRS119116HCC-1NSpatial transcriptomics data of a hepatocellular carcinoma normal section
HRI077812HCC-1maleHRS119117HCC-1LSpatial transcriptomics data of a hepatocellular carcinoma leading-edge section
HRI077812HCC-1maleHRS119118HCC-1TSpatial transcriptomics data of a hepatocellular carcinoma tumor section
HRI077812HCC-1maleHRS119137HCC-1-PBMCWES data of PBMC of a hepatocellular carcinoma patient
HRI077812HCC-1maleHRS119138HCC-1-NWES data of a hepatocellular carcinoma normal section
HRI077812HCC-1maleHRS119139HCC-1-L.NormalWES data of the normal region in a hepatocellular carcinoma leading-edge section
HRI077812HCC-1maleHRS119140HCC-1-L.TumorWES data of the tumor region in a hepatocellular carcinoma leading-edge section
HRI077812HCC-1maleHRS119141HCC-1-TWES data of a hepatocellular carcinoma tumor section
HRI077813cHC-1femaleHRS119119cHC-1NSpatial transcriptomics data of a combined hepatocellular and cholangiocarcinoma normal section
HRI077813cHC-1femaleHRS119120cHC-1LSpatial transcriptomics data of a combined hepatocellular and cholangiocarcinoma leading-edge sectio...
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Files
Request Data
Run accession
Files
Experiment
Experiment title
Platform
Sample
Run accession
Files
Experiment
Experiment title
Platform
Sample
HRR172340HRR172340.bam (22.30 GB)HRX138336HCC-1N_STIllumina NovaSeq 6000HRS119116 (SAMC1547340)
HRR172341HRR172341.bam (17.22 GB)HRX138337HCC-1L_STIllumina NovaSeq 6000HRS119117 (SAMC1547342)
HRR172342HRR172342.bam (18.04 GB)HRX138338HCC-1T_STIllumina NovaSeq 6000HRS119118 (SAMC1547346)
HRR172343HRR172343.bam (16.90 GB)HRX138339cHC-1N_STIllumina NovaSeq 6000HRS119119 (SAMC1547348)
HRR172344HRR172344.bam (25.76 GB)HRX138340cHC-1L_STIllumina NovaSeq 6000HRS119120 (SAMC1547351)
HRR172345HRR172345.bam (23.93 GB)HRX138341cHC-1T_STIllumina NovaSeq 6000HRS119121 (SAMC1547353)
HRR172346HRR172346.bam (12.15 GB)HRX138342HCC-2N_STIllumina NovaSeq 6000HRS119122 (SAMC1547356)
HRR172347HRR172347.bam (17.38 GB)HRX138343HCC-2L_STIllumina NovaSeq 6000HRS119123 (SAMC1547360)
HRR172348HRR172348.bam (10.67 GB)HRX138344HCC-2T_STIllumina NovaSeq 6000HRS119124 (SAMC1547365)
HRR172349HRR172349.bam (7.61 GB)HRX138345HCC-2P_STIllumina NovaSeq 6000HRS119125 (SAMC1547369)
Showing 1 to 10 of 49 rows rows per page
Submitter:   Gu Jin / jgu@tsinghua.edu.cn
Organization:   Tsinghua University
Submission date:   2020-11-09
Requests:   83