| 实验编号 | CRX050203 |
| 物种名称 | Oryza sativa Indica Group |
| 标题 | 9311.HiC |
| 项目编号 | PRJCA001420 |
| 样本编号 | SAMC069968 |
| 测序平台 | Illumina HiSeq X Ten |
| 建库信息 |
| 文库名称 |
文库构建方法 |
建库策略 |
样品来源 |
实验选择 |
文库布局 |
|
Briefly, the leaves were fixed with formaldehyde, lysed, and then the cross-linked DNA digested with MboI over night. Sticky ends were biotinylated and proximity-ligated to form chimeric junctions, that were enriched for and then physically sheared to a size of 500-700 bp. Chimeric fragments representing the original cross-linked long-distance physical interactions were then processed into paired-end sequencing libraries and 150 bp paired-end reads were produced on Illumina HiSeq X platform. |
Hi-C |
GENOMIC |
Restriction Digest |
PAIRED
|
|
| 处理信息 |
Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Insert size (bp): 500
|
| 发布日期 | 2019-05-31 |
|---|
| 测序反应 |
| Run编号 |
Run序列文件信息 |
| File name | File size (MB) |
|---|
| CRR055773 |
CRR055773_f1.fastq.gz
CRR055773_r2.fastq.gz
|
16,597.03
18,871.43
|
|
| 提交者 | lin jing (lolyemily@163.com) |
|---|
| 所属单位 | Beijing Institute of Genomics, Chinese Academy of Sciences |
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| 提交日期 | 2019-05-14 |
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