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CRA002239 Information
Title: Whole genome sequencing of Camellia sinensis var. sinensis
BioProject: PRJCA002071 /
Release date: 2020-04-28
Files: 12
File size: 32.36 GB
Publication
Article title
Genomic DNA barcodes provide novel insights into species delimitation in the complex Camellia sect. Thea (Theaceae)
Journal name
BMC Plant Biology
Year
2025
DOI
10.1186/s12870-025-06612-9
PubMed ID
40307692

Article title
Development of Genome-Wide Intron Length Polymorphism (ILP) Markers in Tea Plant ( Camellia sinensis ) and Related Applications for Genetics Research
Journal name
International Journal of Molecular Sciences
Year
2024
DOI
10.3390/ijms25063241
PubMed ID
38542215

Dataset Downlaod
MetaData:
CRA002239.xlsx
Files:
HTTPS：https://download.cncb.ac.cn/gsa3/CRA002239
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FTP：ftp://download.big.ac.cn/gsa3/CRA002239

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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX105733 Camellia sinensis var. sinensis cv. Biyun PB06 Camellia sinensis PacBio Sequel SAMC126111
Run accession Run alias Run data file information
CRR130326 Camellia sinensis var. sinensis cv. Biyun PB06 File: CRR130326.fastq.gz
CRX105732 Camellia sinensis var. sinensis cv. Biyun PB05 Camellia sinensis PacBio Sequel SAMC126111
Run accession Run alias Run data file information
CRR130325 Camellia sinensis var. sinensis cv. Biyun PB05 File: CRR130325.fastq.gz
CRX105731 Camellia sinensis var. sinensis cv. Biyun PB04 Camellia sinensis PacBio Sequel SAMC126111
Run accession Run alias Run data file information
CRR130324 Camellia sinensis var. sinensis cv. Biyun PB04 File: CRR130324.fastq.gz
CRX105730 Camellia sinensis var. sinensis cv. Biyun PB03 Camellia sinensis PacBio Sequel SAMC126111
Run accession Run alias Run data file information
CRR130323 Camellia sinensis var. sinensis cv. Biyun PB03 File: CRR130323.fastq.gz
CRX105729 Camellia sinensis var. sinensis cv. Biyun PB02 Camellia sinensis PacBio Sequel SAMC126111
Run accession Run alias Run data file information
CRR130322 Camellia sinensis var. sinensis cv. Biyun PB02 File: CRR130322.fastq.gz
CRX105728 Camellia sinensis var. sinensis cv. Biyun PB01 Camellia sinensis PacBio Sequel SAMC126111
Run accession Run alias Run data file information
CRR130321 Camellia sinensis var. sinensis cv. Biyun PB01 File: CRR130321.fastq.gz
CRX081577 Camellia sinensis var. sinensis cv. Biyun RNA02 Camellia sinensis Illumina HiSeq 2500 SAMC126111
Run accession Run alias Run data file information
CRR104548 Camellia sinensis var. sinensis cv. Biyun RNA02 File: CRR104548_f1.fq.gz
File: CRR104548_r2.fq.gz
CRX081576 Camellia sinensis var. sinensis cv. Biyun RNA01 Camellia sinensis Illumina HiSeq 2500 SAMC126112
Run accession Run alias Run data file information
CRR104547 Camellia sinensis var. sinensis cv. Biyun RNA01 File: CRR104547_f1.fq.gz
File: CRR104547_r2.fq.gz
CRX081574 Camellia sinensis var. sinensis cv. Biyun PE01 Camellia sinensis Illumina HiSeq 2500 SAMC126111
Run accession Run alias Run data file information
CRR104540 Camellia sinensis var. sinensis cv. Biyun PE01 File: CRR104540_f1.fq.gz
File: CRR104540_r2.fq.gz
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Submitter:Wei Li (liweisdau@126.com)
Organization:South China Agricultural University
Submitted date:2019-12-28