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CRA002516 Information
Title: The genome assembly and annotation of Zea mays cultivar inbred line RP125
BioProject: PRJCA002331 /
Release date: 2022-01-01
Files: 77
File size: 466.89 GB
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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX103422 Hi-C sequencing of RP125 Zea mays Illumina NovaSeq 6000 SAMC146577
Run accession Run alias Run data file information
CRR127970 Hi-C sequencing of RP125 S1 File: CRR127970_f1.fastq.gz
File: CRR127970_r2.fastq.gz
CRR127971 Hi-C sequencing of RP125 S2 File: CRR127971_f1.fastq.gz
File: CRR127971_r2.fastq.gz
CRR127972 Hi-C sequencing of RP125 S3 File: CRR127972_f1.fastq.gz
File: CRR127972_r2.fastq.gz
CRR127973 Hi-C sequencing of RP125 S4 File: CRR127973_f1.fastq.gz
File: CRR127973_r2.fastq.gz
CRR127974 Hi-C sequencing of RP125 S5 File: CRR127974_f1.fastq.gz
File: CRR127974_r2.fastq.gz
CRR127975 Hi-C sequencing of RP125 S6 File: CRR127975_f1.fastq.gz
File: CRR127975_r2.fastq.gz
CRR127976 Hi-C sequencing of RP125 S7 File: CRR127976_f1.fastq.gz
File: CRR127976_r2.fastq.gz
CRR127977 Hi-C sequencing of RP125 S8 File: CRR127977_f1.fastq.gz
File: CRR127977_r2.fastq.gz
CRR127978 Hi-C sequencing of RP125 S9 File: CRR127978_f1.fastq.gz
File: CRR127978_r2.fastq.gz
CRX103421 Nanopore sequencing of RP125 Zea mays OXFORD_NANOPORE GridION SAMC146576
Run accession Run alias Run data file information
CRR127963 Nanopore sequencing of RP125 S1 File: CRR127963.fastq.gz
CRR127964 Nanopore sequencing of RP125 S2 File: CRR127964.fastq.gz
CRR127965 Nanopore sequencing of RP125 S3 File: CRR127965.fastq.gz
CRR127966 Nanopore sequencing of RP125 S4 File: CRR127966.fastq.gz
CRR127967 Nanopore sequencing of RP125 S5 File: CRR127967.fastq.gz
CRR127968 Nanopore sequencing of RP125 S6 File: CRR127968.fastq.gz
CRR127969 Nanopore sequencing of RP125 S7 File: CRR127969.fastq.gz
CRX103420 Whole genome sequencing of RP125 Zea mays Illumina NovaSeq 6000 SAMC146575
Run accession Run alias Run data file information
CRR127962 Whole genome sequencing of RP125 File: CRR127962_f1.fq.gz
File: CRR127962_r2.fq.gz
CRX103419 RP125.RNAseq of auricle region 2 Zea mays Illumina HiSeq 2000 SAMC146574
Run accession Run alias Run data file information
CRR127959 RP125.RNAseq of auricle region 2 rep 1 File: CRR127959_f1.fq.gz
File: CRR127959_r2.fq.gz
CRR127960 RP125.RNAseq of auricle region 2 rep 2 File: CRR127960_f1.fq.gz
File: CRR127960_r2.fq.gz
CRR127961 RP125.RNAseq of auricle region 2 rep 3 File: CRR127961_f1.fq.gz
File: CRR127961_r2.fq.gz
CRX103418 RP125.RNAseq of auricle region 1 Zea mays Illumina HiSeq 2000 SAMC146573
Run accession Run alias Run data file information
CRR127956 RP125.RNAseq of auricle region 1 rep 1 File: CRR127956_f1.fq.gz
File: CRR127956_r2.fq.gz
CRR127957 RP125.RNAseq of auricle region 1 rep 2 File: CRR127957_f1.fq.gz
File: CRR127957_r2.fq.gz
CRR127958 RP125.RNAseq of auricle region 1 rep 3 File: CRR127958_f1.fq.gz
File: CRR127958_r2.fq.gz
CRX103417 RP125.RNAseq of leaf Zea mays Illumina HiSeq 2000 SAMC146572
Run accession Run alias Run data file information
CRR127954 RP125.RNAseq of leaf 1 File: CRR127954_f1.fq.gz
File: CRR127954_r2.fq.gz
CRR127955 RP125.RNAseq of leaf 2 File: CRR127955_f1.fq.gz
File: CRR127955_r2.fq.gz
CRX103416 RP125.RNAseq of 10th leaf Zea mays Illumina HiSeq 2000 SAMC146571
Run accession Run alias Run data file information
CRR127951 RP125.RNAseq of 10th leaf 1 File: CRR127951_f1.fq.gz
File: CRR127951_r2.fq.gz
CRR127952 RP125.RNAseq of 10th leaf 2 File: CRR127952_f1.fq.gz
File: CRR127952_r2.fq.gz
CRR127953 RP125.RNAseq of 10th leaf 3 File: CRR127953_f1.fq.gz
File: CRR127953_r2.fq.gz
CRX103415 RP125.RNAseq of immature leaf Zea mays Illumina HiSeq 2000 SAMC146570
Run accession Run alias Run data file information
CRR127948 RP125.RNAseq of immature leaf 1 File: CRR127948_f1.fq.gz
File: CRR127948_r2.fq.gz
CRR127949 RP125.RNAseq of immature leaf 2 File: CRR127949_f1.fq.gz
File: CRR127949_r2.fq.gz
CRR127950 RP125.RNAseq of immature leaf 3 File: CRR127950_f1.fq.gz
File: CRR127950_r2.fq.gz
CRX103414 RP125.RNAseq of 8th leaf Zea mays Illumina HiSeq 2000 SAMC146569
Run accession Run alias Run data file information
CRR127945 RP125.RNAseq of 8th leaf 1 File: CRR127945_f1.fq.gz
File: CRR127945_r2.fq.gz
CRR127946 RP125.RNAseq of 8th leaf 2 File: CRR127946_f1.fq.gz
File: CRR127946_r2.fq.gz
CRR127947 RP125.RNAseq of 8th leaf 3 File: CRR127947_f1.fq.gz
File: CRR127947_r2.fq.gz
CRX103413 RP125.RNAseq of 15 DAP kernel Zea mays Illumina HiSeq 2000 SAMC146568
Run accession Run alias Run data file information
CRR127943 RP125.RNAseq of 15 DAP kernel 1 File: CRR127943_f1.fq.gz
File: CRR127943_r2.fq.gz
CRR127944 RP125.RNAseq of 15 DAP kernel 2 File: CRR127944_f1.fq.gz
File: CRR127944_r2.fq.gz
CRX103412 RP125.RNAseq of 13 DAP kernel Zea mays Illumina HiSeq 2000 SAMC146567
Run accession Run alias Run data file information
CRR127941 RP125.RNAseq of 13 DAP kernel 1 File: CRR127941_f1.fq.gz
File: CRR127941_r2.fq.gz
CRR127942 RP125.RNAseq of 13 DAP kernel 2 File: CRR127942_f1.fq.gz
File: CRR127942_r2.fq.gz
CRX103411 RP125.RNAseq of 11 DAP kernel Zea mays Illumina HiSeq 2000 SAMC146566
Run accession Run alias Run data file information
CRR127939 RP125.RNAseq of 11 DAP kernel 1 File: CRR127939_f1.fq.gz
File: CRR127939_r2.fq.gz
CRR127940 RP125.RNAseq of 11 DAP kernel 2 File: CRR127940_f1.fq.gz
File: CRR127940_r2.fq.gz
CRX103410 RP125.RNAseq of 8 DAP kernel Zea mays Illumina HiSeq 2000 SAMC146565
Run accession Run alias Run data file information
CRR127937 RP125.RNAseq of 8 DAP kernel 1 File: CRR127937_f1.fq.gz
File: CRR127937_r2.fq.gz
CRR127938 RP125.RNAseq of 8 DAP kernel 2 File: CRR127938_f1.fq.gz
File: CRR127938_r2.fq.gz
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Submitter:Zhiming Zhang (zhzhang@sdau.edu.cn)
Organization:Shandong Agricultural University
Date submitted:2020-04-06