Experiment information
Accession CRX106196
Organism Homo sapiens
Title CM2
BioProject PRJCA002579
BioSample SAMC181258
Platform Illumina HiSeq X Ten
Library
Library name Construction protocol Strategy Source Selection Layout
The single cell RNA libraries were prepared using the ChromiumTM Single cell 5’ Reagent Kit of Chromium platform (10x Genomics, USA) following the manufacturer’s instruction. Generated single cell RNA libraries were sequenced on the Illumina HiSeq X Ten platform. The CellRanger software (version 3.1.0) was used for preprocessing of the PE150 Illumina sequencing reads. RNA-Seq TRANSCRIPTOMIC RANDOM PAIRED
Processing Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Insert size (bp): 400
Release date2020-07-27
Run
Run accession Release date Run data file information
File nameFile size (MB)
CRR130792 2020-07-27 CM2-CDNA-library-1_combined_R1.fastq.gz
CM2-CDNA-library-1_combined_R2.fastq.gz
6,984.75
7,506.21
CRR130793 2020-07-27 CM2-CDNA-library-2_combined_R1.fastq.gz
CM2-CDNA-library-2_combined_R2.fastq.gz
6,859.34
7,424.46
CRR130794 2020-07-27 CM2-CDNA-library-3_combined_R1.fastq.gz
CM2-CDNA-library-3_combined_R2.fastq.gz
7,367.03
7,963.17
CRR130795 2020-07-27 CM2-CDNA-library-4_combined_R1.fastq.gz
CM2-CDNA-library-4_combined_R2.fastq.gz
6,129.79
6,616.52
CRR130796 2020-07-27 CM2-CDNA-library-SP-1_combined_R1.fastq.gz
CM2-CDNA-library-SP-1_combined_R2.fastq.gz
379.05
387.13
CRR130797 2020-07-27 CM2-CDNA-library-SP-2_combined_R1.fastq.gz
CM2-CDNA-library-SP-2_combined_R2.fastq.gz
320.42
324.21
CRR130798 2020-07-27 CM2-CDNA-library-SP-3_combined_R1.fastq.gz
CM2-CDNA-library-SP-3_combined_R2.fastq.gz
280.15
285.98
CRR130799 2020-07-27 CM2-CDNA-library-SP-4_combined_R1.fastq.gz
CM2-CDNA-library-SP-4_combined_R2.fastq.gz
314.62
320.21
SubmitterPenghui Zhou (zhouph@sysucc.org.cn)
OrganizationSun Yat-sen University Cancer Center
Date submitted2020-04-24