| Accession | CRX109833 |
| Organism | Rosa rugosa |
| Title | Rosa_rugosa03 |
| BioProject | PRJCA002607 |
| BioSample | SAMC184789 |
| Platform | Illumina NovaSeq 6000 |
| Library |
| Library name |
Construction protocol |
Strategy |
Source |
Selection |
Layout |
|
DNA was extracted from the leaves using DNeasy Plant Mini Kit (QIAGEN). After crosslinking, the samples were used for quality, biotinylated DNA fragments were enriched and sheared to a fragment size of 100-500 bp by sonication. After A-tailing, pulldown, and adapter ligation, the Hi-C library was sequenced on an Illumina NovaSeq 6000 with PE150 module. |
WGS |
GENOMIC |
PCR |
PAIRED
|
|
| Processing |
Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Insert size (bp): 350
|
| Release date | 2021-12-09 |
|---|
| Run |
| Run accession |
Run data file information |
| File name | File size (MB) |
|---|
| CRR135281 |
CRR135281_f1.fq.gz
CRR135281_r2.fq.gz
|
1,048.52
1,020.36
|
| CRR135282 |
CRR135282_f1.fq.gz
CRR135282_r2.fq.gz
|
14,697.89
15,387.77
|
|
| Submitter | Zang Dekui (1075869208@qq.com) |
|---|
| Organization | Shandong Agricultural Univesity |
|---|
| Date submitted | 2020-05-09 |
|---|
