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CRA003122 Information
Title: Genome sequence evolutionary analysis of SARS-CoV-2
BioProject: PRJCA003179 /
Release date: 2021-06-07
Files: 600
File size: 612.16 GB
Publication
Article title
Genomic Epidemiology of SARS-CoV-2 in Pakistan
Journal name
Genomics, Proteomics & Bioinformatics
Year
2021
DOI
10.1016/j.gpb.2021.08.007
PubMed ID
34695600

Dataset Downlaod
MetaData:
CRA003122.xlsx
Files:
HTTPS：https://download.cncb.ac.cn/gsa/CRA003122
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FTP：ftp://download.big.ac.cn/gsa/CRA003122

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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX149953 Genome sequencing of SARS-CoV-2 isolates from E150 by PCR Severe acute respiratory syndrome coronavirus 2 Illumina HiSeq X Ten SAMC204371
Run accession Run alias Run data file information
CRR176162 Genome sequencing of SARS-CoV-2 isolates from E150 by PCR File: CRR176162_f1.fq.gz
File: CRR176162_r2.fq.gz
CRX149952 Genome sequencing of SARS-CoV-2 isolates from E149 by PCR Severe acute respiratory syndrome coronavirus 2 Illumina HiSeq X Ten SAMC204370
Run accession Run alias Run data file information
CRR176161 Genome sequencing of SARS-CoV-2 isolates from E149 by PCR File: CRR176161_f1.fq.gz
File: CRR176161_r2.fq.gz
CRX149951 Genome sequencing of SARS-CoV-2 isolates from E148 by PCR Severe acute respiratory syndrome coronavirus 2 Illumina HiSeq X Ten SAMC204369
Run accession Run alias Run data file information
CRR176160 Genome sequencing of SARS-CoV-2 isolates from E148 by PCR File: CRR176160_f1.fq.gz
File: CRR176160_r2.fq.gz
CRX149950 Genome sequencing of SARS-CoV-2 isolates from E147 by PCR Severe acute respiratory syndrome coronavirus 2 Illumina HiSeq X Ten SAMC204368
Run accession Run alias Run data file information
CRR176159 Genome sequencing of SARS-CoV-2 isolates from E147 by PCR File: CRR176159_f1.fq.gz
File: CRR176159_r2.fq.gz
CRX149949 Genome sequencing of SARS-CoV-2 isolates from E146 by PCR Severe acute respiratory syndrome coronavirus 2 Illumina HiSeq X Ten SAMC204367
Run accession Run alias Run data file information
CRR176158 Genome sequencing of SARS-CoV-2 isolates from E146 by PCR File: CRR176158_f1.fq.gz
File: CRR176158_r2.fq.gz
CRX149948 Genome sequencing of SARS-CoV-2 isolates from E145 by PCR Severe acute respiratory syndrome coronavirus 2 Illumina HiSeq X Ten SAMC204366
Run accession Run alias Run data file information
CRR176157 Genome sequencing of SARS-CoV-2 isolates from E145 by PCR File: CRR176157_f1.fq.gz
File: CRR176157_r2.fq.gz
CRX149947 Genome sequencing of SARS-CoV-2 isolates from E144 by PCR Severe acute respiratory syndrome coronavirus 2 Illumina HiSeq X Ten SAMC204365
Run accession Run alias Run data file information
CRR176156 Genome sequencing of SARS-CoV-2 isolates from E144 by PCR File: CRR176156_f1.fq.gz
File: CRR176156_r2.fq.gz
CRX149946 Genome sequencing of SARS-CoV-2 isolates from E143 by PCR Severe acute respiratory syndrome coronavirus 2 Illumina HiSeq X Ten SAMC204364
Run accession Run alias Run data file information
CRR176155 Genome sequencing of SARS-CoV-2 isolates from E143 by PCR File: CRR176155_f1.fq.gz
File: CRR176155_r2.fq.gz
CRX149945 Genome sequencing of SARS-CoV-2 isolates from E142 by PCR Severe acute respiratory syndrome coronavirus 2 Illumina HiSeq X Ten SAMC204363
Run accession Run alias Run data file information
CRR176154 Genome sequencing of SARS-CoV-2 isolates from E142 by PCR File: CRR176154_f1.fq.gz
File: CRR176154_r2.fq.gz
CRX149944 Genome sequencing of SARS-CoV-2 isolates from E141 by PCR Severe acute respiratory syndrome coronavirus 2 Illumina HiSeq X Ten SAMC204362
Run accession Run alias Run data file information
CRR176153 Genome sequencing of SARS-CoV-2 isolates from E141 by PCR File: CRR176153_f1.fq.gz
File: CRR176153_r2.fq.gz
CRX149943 Genome sequencing of SARS-CoV-2 isolates from E140 by PCR Severe acute respiratory syndrome coronavirus 2 Illumina HiSeq X Ten SAMC204361
Run accession Run alias Run data file information
CRR176152 Genome sequencing of SARS-CoV-2 isolates from E140 by PCR File: CRR176152_f1.fq.gz
File: CRR176152_r2.fq.gz
CRX149942 Genome sequencing of SARS-CoV-2 isolates from E139 by PCR Severe acute respiratory syndrome coronavirus 2 Illumina HiSeq X Ten SAMC204360
Run accession Run alias Run data file information
CRR176151 Genome sequencing of SARS-CoV-2 isolates from E139 by PCR File: CRR176151_f1.fq.gz
File: CRR176151_r2.fq.gz
CRX149941 Genome sequencing of SARS-CoV-2 isolates from E138 by PCR Severe acute respiratory syndrome coronavirus 2 Illumina HiSeq X Ten SAMC204359
Run accession Run alias Run data file information
CRR176150 Genome sequencing of SARS-CoV-2 isolates from E138 by PCR File: CRR176150_f1.fq.gz
File: CRR176150_r2.fq.gz
CRX149940 Genome sequencing of SARS-CoV-2 isolates from E137 by PCR Severe acute respiratory syndrome coronavirus 2 Illumina HiSeq X Ten SAMC204358
Run accession Run alias Run data file information
CRR176149 Genome sequencing of SARS-CoV-2 isolates from E137 by PCR File: CRR176149_f1.fq.gz
File: CRR176149_r2.fq.gz
CRX149939 Genome sequencing of SARS-CoV-2 isolates from E136 by PCR Severe acute respiratory syndrome coronavirus 2 Illumina HiSeq X Ten SAMC204357
Run accession Run alias Run data file information
CRR176148 Genome sequencing of SARS-CoV-2 isolates from E136 by PCR File: CRR176148_f1.fq.gz
File: CRR176148_r2.fq.gz
CRX149938 Genome sequencing of SARS-CoV-2 isolates from E135 by PCR Severe acute respiratory syndrome coronavirus 2 Illumina HiSeq X Ten SAMC204356
Run accession Run alias Run data file information
CRR176147 Genome sequencing of SARS-CoV-2 isolates from E135 by PCR File: CRR176147_f1.fq.gz
File: CRR176147_r2.fq.gz
CRX149937 Genome sequencing of SARS-CoV-2 isolates from E134 by PCR Severe acute respiratory syndrome coronavirus 2 Illumina HiSeq X Ten SAMC204355
Run accession Run alias Run data file information
CRR176146 Genome sequencing of SARS-CoV-2 isolates from E134 by PCR File: CRR176146_f1.fq.gz
File: CRR176146_r2.fq.gz
CRX149936 Genome sequencing of SARS-CoV-2 isolates from E133 by PCR Severe acute respiratory syndrome coronavirus 2 Illumina HiSeq X Ten SAMC204354
Run accession Run alias Run data file information
CRR176145 Genome sequencing of SARS-CoV-2 isolates from E133 by PCR File: CRR176145_f1.fq.gz
File: CRR176145_r2.fq.gz
CRX149935 Genome sequencing of SARS-CoV-2 isolates from E132 by PCR Severe acute respiratory syndrome coronavirus 2 Illumina HiSeq X Ten SAMC204353
Run accession Run alias Run data file information
CRR176144 Genome sequencing of SARS-CoV-2 isolates from E132 by PCR File: CRR176144_f1.fq.gz
File: CRR176144_r2.fq.gz
CRX149934 Genome sequencing of SARS-CoV-2 isolates from E131 by PCR Severe acute respiratory syndrome coronavirus 2 Illumina HiSeq X Ten SAMC204352
Run accession Run alias Run data file information
CRR176143 Genome sequencing of SARS-CoV-2 isolates from E131 by PCR File: CRR176143_f1.fq.gz
File: CRR176143_r2.fq.gz
Submitter:li cp (licp@big.ac.cn)
Organization:Beijing Institute of Genomics, Chinese Academy of Sciences
Date submitted:2020-08-20