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实验基本信息
实验编号 CRX238969
物种名称 Mus musculus
标题 in vivo baseline_1
项目编号 PRJCA004965
样本编号 SAMC354708
测序平台 Illumina HiSeq X Ten
建库信息
文库名称 文库构建方法 建库策略 样品来源 实验选择 文库布局
mMCE sgRNA library was transduced into MC38 cells for tumorigenesis in nude or C57 mice with different treatment to validate profiled tumor heterogeneity. Together with inoculation, cultured MC38 cells with mMCE library were collected as in vitro baseline. Tumors were randomly divided into the following groups, nude mice or WT mice with IgG, PD1, PDL1 or CD4 and CD8 antibodies treatment. Before treatment, five additional WT tumors were collected as in vivo baseline. Nine days after treatment, tumors were collected and grinded into homogeneous powders in liquid nitrogen. Genomic DNA were extracted from the powders. AMPLICON OTHER PCR PAIRED
处理信息 Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
发布日期2021-09-15
测序反应
Run编号 Run序列文件信息
File nameFile size (MB)
CRR282320 CRR282320_f1.fastq.gz
CRR282320_r2.fastq.gz
446.68
524.04
提交者Tian-Yu Song (songtianyu@zju.edu.cn)
所属单位ShanghaiTech University
提交日期2021-05-10