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CRA004611 Information
Title: Analysis of gut-liver transcriptome and gut microbiota upon seabuchthorn or sinomenine inclusion into SBM diet in zebrafish_16S
BioProject: PRJCA005917 /
Release date: 2022-06-30
Files: 48
File size: <1 GB
Publication
Article title
Sinomenine Hydrochloride Ameliorates Fish Foodborne Enteritis via α7nAchR-Mediated Anti-Inflammatory Effect Whilst Altering Microbiota Composition
Journal name
Frontiers in Immunology
Year
2021
DOI
10.3389/fimmu.2021.766845
PubMed ID
34887862

Dataset Downlaod
MetaData:
CRA004611.xlsx
Files:
HTTPS：https://download.cncb.ac.cn/gsa/CRA004611
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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX260042 ZTPSN20ES407_SN353 fish gut metagenome Illumina NovaSeq 6000 SAMC436059
Run accession Run alias Run data file information
CRR305391 ZTPSN20ES407_SN353 File: CRR305391_f1.fq.gz
File: CRR305391_r2.fq.gz
CRX260041 ZTPSN20ES406_SN352 fish gut metagenome Illumina NovaSeq 6000 SAMC436058
Run accession Run alias Run data file information
CRR305390 ZTPSN20ES406_SN352 File: CRR305390_f1.fq.gz
File: CRR305390_r2.fq.gz
CRX260040 ZTPSN20ES405_SN351 fish gut metagenome Illumina NovaSeq 6000 SAMC436057
Run accession Run alias Run data file information
CRR305389 ZTPSN20ES405_SN351 File: CRR305389_f1.fq.gz
File: CRR305389_r2.fq.gz
CRX260039 ZTPSN20ES404_SB50003 fish gut metagenome Illumina NovaSeq 6000 SAMC436056
Run accession Run alias Run data file information
CRR305388 ZTPSN20ES404_SB50003 File: CRR305388_f1.fq.gz
File: CRR305388_r2.fq.gz
CRX260038 ZTPSN20ES403_SB50002 fish gut metagenome Illumina NovaSeq 6000 SAMC436055
Run accession Run alias Run data file information
CRR305387 ZTPSN20ES403_SB50002 File: CRR305387_f1.fq.gz
File: CRR305387_r2.fq.gz
CRX260037 ZTPSN20ES402_SB50001 fish gut metagenome Illumina NovaSeq 6000 SAMC436054
Run accession Run alias Run data file information
CRR305386 ZTPSN20ES402_SB50001 File: CRR305386_f1.fq.gz
File: CRR305386_r2.fq.gz
CRX260036 ZTPSN20ES401_50SBM3 fish gut metagenome Illumina NovaSeq 6000 SAMC436053
Run accession Run alias Run data file information
CRR305385 ZTPSN20ES401_50SBM3 File: CRR305385_f1.fq.gz
File: CRR305385_r2.fq.gz
CRX260035 ZTPSN20ES400_50SBM2 fish gut metagenome Illumina NovaSeq 6000 SAMC436052
Run accession Run alias Run data file information
CRR305384 ZTPSN20ES400_50SBM2 File: CRR305384_f1.fq.gz
File: CRR305384_r2.fq.gz
CRX260034 ZTPSN20ES399_SBM1 fish gut metagenome Illumina NovaSeq 6000 SAMC436051
Run accession Run alias Run data file information
CRR305383 ZTPSN20ES399_SBM1 File: CRR305383_f1.fq.gz
File: CRR305383_r2.fq.gz
CRX260033 ZTPSN20ES398_FM3 fish gut metagenome Illumina NovaSeq 6000 SAMC436050
Run accession Run alias Run data file information
CRR305382 ZTPSN20ES398_FM3 File: CRR305382_f1.fq.gz
File: CRR305382_r2.fq.gz
CRX260032 ZTPSN20ES397_FM2 fish gut metagenome Illumina NovaSeq 6000 SAMC436049
Run accession Run alias Run data file information
CRR305381 ZTPSN20ES397_FM2 File: CRR305381_f1.fq.gz
File: CRR305381_r2.fq.gz
CRX260031 ZTPSN20ES396_FM1 fish gut metagenome Illumina NovaSeq 6000 SAMC436048
Run accession Run alias Run data file information
CRR305380 ZTPSN20ES396_FM1 File: CRR305380_f1.fq.gz
File: CRR305380_r2.fq.gz
CRX260030 SZTPSN20BM865_B50003 fish gut metagenome Illumina NovaSeq 6000 SAMC436047
Run accession Run alias Run data file information
CRR305379 SZTPSN20BM865_B50003 File: CRR305379_f1.fq.gz
File: CRR305379_r2.fq.gz
CRX260029 ZTPSN20BM864_SB50002 fish gut metagenome Illumina NovaSeq 6000 SAMC436046
Run accession Run alias Run data file information
CRR305378 ZTPSN20BM864_SB50002 File: CRR305378_f1.fq.gz
File: CRR305378_r2.fq.gz
CRX260028 ZTPSN20BM863_SB50001 fish gut metagenome Illumina NovaSeq 6000 SAMC436045
Run accession Run alias Run data file information
CRR305377 ZTPSN20BM863_SB50001 File: CRR305377_f1.fq.gz
File: CRR305377_r2.fq.gz
CRX260027 ZTPSN20BM862_SN353 fish gut metagenome Illumina NovaSeq 6000 SAMC436044
Run accession Run alias Run data file information
CRR305376 ZTPSN20BM862_SN353 File: CRR305376_f1.fq.gz
File: CRR305376_r2.fq.gz
CRX260026 ZTPSN20BM861_SN352 fish gut metagenome Illumina NovaSeq 6000 SAMC436043
Run accession Run alias Run data file information
CRR305375 ZTPSN20BM861_SN352 File: CRR305375_f1.fq.gz
File: CRR305375_r2.fq.gz
CRX260025 ZTPSN20BM860_SN351 fish gut metagenome Illumina NovaSeq 6000 SAMC436042
Run accession Run alias Run data file information
CRR305374 ZTPSN20BM860_SN351 File: CRR305374_f1.fq.gz
File: CRR305374_r2.fq.gz
CRX260024 ZTPSN20BM859_50SBM3 fish gut metagenome Illumina NovaSeq 6000 SAMC436041
Run accession Run alias Run data file information
CRR305373 ZTPSN20BM859_50SBM3 File: CRR305373_f1.fq.gz
File: CRR305373_r2.fq.gz
CRX260023 ZTPSN20BM858_50SBM2 fish gut metagenome Illumina NovaSeq 6000 SAMC436040
Run accession Run alias Run data file information
CRR305372 ZTPSN20BM858_50SBM2 File: CRR305372_f1.fq.gz
File: CRR305372_r2.fq.gz
Submitter:Xiao-Qin Xia (bioinfo@ihb.ac.cn)
Organization:Institute of Hydrobiology
Date submitted:2021-07-22