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CRA005149 Information
Title: ECT2/ECT3/ECT4 heterotrimer enhances mRNA stability through direct interaction of PAB proteins in Arabidopsis
BioProject: PRJCA006682 /
Release date: 2023-03-30
Files: 56
File size: 123.36 GB
Publication
Article title
m6A readers ECT2/ECT3/ECT4 enhance mRNA stability through direct recruitment of the poly(A) binding proteins in Arabidopsis
Journal name
Genome Biology
Year
2023
DOI
10.1186/s13059-023-02947-4
PubMed ID
37122016

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MetaData:
CRA005149.xlsx
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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX282130 Ribo-seq-ect2-rep2 Arabidopsis thaliana Illumina HiSeq 2500 SAMC465111
Run accession Run alias Run data file information
CRR329741 Ribo-seq1-ect2-rep2 File: CRR329741.fastq.gz
CRX282129 Ribo-seq-ect2-rep1 Arabidopsis thaliana Illumina HiSeq 2500 SAMC465110
Run accession Run alias Run data file information
CRR329740 Ribo-seq1-ect2-rep1 File: CRR329740.fastq.gz
CRX282128 Ribo-seq-Col0-rep2 Arabidopsis thaliana Illumina HiSeq 2500 SAMC465109
Run accession Run alias Run data file information
CRR329739 Ribo-seq1-Col0-rep2 File: CRR329739.fastq.gz
CRX282127 Ribo-seq-Col0-rep1 Arabidopsis thaliana Illumina HiSeq 2500 SAMC465108
Run accession Run alias Run data file information
CRR329738 Ribo-seq1-Col0-rep1 File: CRR329738.fastq.gz
CRX280986 APA-seq-ect234-rep2 Arabidopsis thaliana Illumina HiSeq X Ten SAMC464116
Run accession Run alias Run data file information
CRR328572 APA-seq-ect234-rep2 File: CRR328572_f1.fastq.gz
File: CRR328572_r2.fastq.gz
CRX280985 APA-seq-ect234-rep1 Arabidopsis thaliana Illumina HiSeq X Ten SAMC464115
Run accession Run alias Run data file information
CRR328571 APA-seq-ect234-rep1 File: CRR328571_f1.fastq.gz
File: CRR328571_r2.fastq.gz
CRX280984 Ribo-seq2-ect234-input-rep2 Arabidopsis thaliana Illumina HiSeq X Ten SAMC464114
Run accession Run alias Run data file information
CRR328570 Ribo-seq2-ect234-input-rep2 File: CRR328570_f1.fastq.gz
File: CRR328570_r2.fastq.gz
CRX280983 Ribo-seq2-ect234-input-rep1 Arabidopsis thaliana Illumina HiSeq X Ten SAMC464113
Run accession Run alias Run data file information
CRR328569 Ribo-seq2-ect234-input-rep1 File: CRR328569_f1.fastq.gz
File: CRR328569_r2.fastq.gz
CRX280982 Ribo-seq2-Col0-input-rep2 Arabidopsis thaliana Illumina HiSeq X Ten SAMC464112
Run accession Run alias Run data file information
CRR328568 Ribo-seq2-Col0-input-rep2 File: CRR328568_f1.fastq.gz
File: CRR328568_r2.fastq.gz
CRX280981 Ribo-seq2-Col0-input-rep1 Arabidopsis thaliana Illumina HiSeq X Ten SAMC464111
Run accession Run alias Run data file information
CRR328567 Ribo-seq2-Col0-input-rep1 File: CRR328567_f1.fastq.gz
File: CRR328567_r2.fastq.gz
CRX280980 Ribo-seq2-ect234-rep2 Arabidopsis thaliana Illumina HiSeq X Ten SAMC464110
Run accession Run alias Run data file information
CRR328566 Ribo-seq2-ect234-rep2 File: CRR328566_f1.fastq.gz
File: CRR328566_r2.fastq.gz
CRX280979 Ribo-seq2-ect234-rep1 Arabidopsis thaliana Illumina HiSeq X Ten SAMC464109
Run accession Run alias Run data file information
CRR328565 Ribo-seq2-ect234-rep1 File: CRR328565_f1.fastq.gz
File: CRR328565_r2.fastq.gz
CRX280978 Ribo-seq2-Col0-rep2 Arabidopsis thaliana Illumina HiSeq X Ten SAMC464108
Run accession Run alias Run data file information
CRR328564 Ribo-seq2-Col0-rep2 File: CRR328564_f1.fastq.gz
File: CRR328564_r2.fastq.gz
CRX280977 Ribo-seq2-Col0-rep1 Arabidopsis thaliana Illumina HiSeq X Ten SAMC464107
Run accession Run alias Run data file information
CRR328563 Ribo-seq2-Col0-rep1 File: CRR328563_f1.fastq.gz
File: CRR328563_r2.fastq.gz
CRX280972 RNA-seq-ect234-6h-rep2 Arabidopsis thaliana Illumina HiSeq X Ten SAMC464102
Run accession Run alias Run data file information
CRR328558 RNA-seq-ect234-6h-rep2 File: CRR328558_f1.fastq.gz
File: CRR328558_r2.fastq.gz
CRX280971 RNA-seq-ect234-6h-rep1 Arabidopsis thaliana Illumina HiSeq X Ten SAMC464101
Run accession Run alias Run data file information
CRR328557 RNA-seq-ect234-6h-rep1 File: CRR328557_f1.fastq.gz
File: CRR328557_r2.fastq.gz
CRX280970 RNA-seq-ect234-4h-rep2 Arabidopsis thaliana Illumina HiSeq X Ten SAMC464100
Run accession Run alias Run data file information
CRR328556 RNA-seq-ect234-4h-rep2 File: CRR328556_f1.fastq.gz
File: CRR328556_r2.fastq.gz
CRX280969 RNA-seq-ect234-4h-rep1 Arabidopsis thaliana Illumina HiSeq X Ten SAMC464099
Run accession Run alias Run data file information
CRR328555 RNA-seq-ect234-4h-rep1 File: CRR328555_f1.fastq.gz
File: CRR328555_r2.fastq.gz
CRX280968 RNA-seq-ect234-0h-rep2 Arabidopsis thaliana Illumina HiSeq X Ten SAMC464098
Run accession Run alias Run data file information
CRR328554 RNA-seq-ect234-0h-rep2 File: CRR328554_f1.fastq.gz
File: CRR328554_r2.fastq.gz
CRX280967 RNA-seq-ect234-0h-rep1 Arabidopsis thaliana Illumina HiSeq X Ten SAMC464097
Run accession Run alias Run data file information
CRR328553 RNA-seq-ect234-0h-rep1 File: CRR328553_f1.fastq.gz
File: CRR328553_r2.fastq.gz
Submitter:Peizhe Song (1701110333@pku.edu.cn)
Organization:Peking University
Date submitted:2021-09-23