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实验基本信息
实验编号 CRX282176
物种名称 Dendrobium officinale
标题 RNAseq of CK1
项目编号 PRJCA002680
样本编号 SAMC465215
测序平台 Illumina HiSeq 4000
建库信息
文库名称 文库构建方法 建库策略 样品来源 实验选择 文库布局
Total RNA was extracted using Trizol reagent (Invitrogen, CA, USA) following the manufacturer's procedure. The total RNA quantity and purity were analysis of Bioanalyzer 2100 and RNA 6000 Nano LabChip Kit (Agilent, CA, USA) with RIN number >7.0. Approximately 10 ug of total RNA representing a specific adipose type was subjected to isolate Poly (A) mRNA with poly-T oligo attached magnetic beads (Invitrogen). Following purification, the mRNA is fragmented into small pieces using divalent cations under elevated temperature. Then the cleaved RNA fragments were reverse-transcribed to create the final cDNA library in accordance with the protocol for the mRNASeq sample preparation kit (Illumina, San Diego, USA), the average insert size for the paired-end libraries was 300 bp (±50 bp). RNA-Seq TRANSCRIPTOMIC unspecified PAIRED
处理信息 Planned read length (bp) for mate 1: 100
Planned read length (bp) for mate 2: 100
Insert size (bp): 300
发布日期2021-10-29
测序反应
Run编号 Run序列文件信息
File nameFile size (MB)
CRR329794 CRR329794_f1.fq.gz
CRR329794_r2.fq.gz
2,350.06
2,404.41
提交者Xinqiao Zhan (qiao1605@126.com)
所属单位Zhejiang University
提交日期2021-10-12
关联实验
Experiments(2)