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CRA005317 Information

Title: DENA: training an authentic neural network model using Nanopore sequencing data of Arabidopsis transcripts for detection and quantification of N6-methyladenosine on RNA

BioProject: PRJCA007105 /

Release date: 2021-12-09

Files: 9

File size: 1006.92 GB

Publication

Article title

DENA: training an authentic neural network model using Nanopore sequencing data of Arabidopsis transcripts for detection and quantification of N6-methyladenosine on RNA

Journal name

Genome Biology

Year

2022

DOI

10.1186/s13059-021-02598-3

PubMed ID

35039061

Dataset Downlaod

MetaData:

CRA005317.xlsx

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Experiments & Runs

Experiment accession	Title	Taxon name	Platform	Sample accession
CRX289367	mtb_Rep3	Arabidopsis thaliana	OXFORD_NANOPORE MinION	SAMC477350
Run accession	Run alias		Run data file information
CRR337272	mtb_Rep3_Run		File: CRR337272.tar.gz
CRX289366	mtb_Rep2	Arabidopsis thaliana	OXFORD_NANOPORE MinION	SAMC477349
Run accession	Run alias		Run data file information
CRR337271	mtb_Rep2_Run		File: CRR337271.tar.gz
CRX289365	mtb_Rep1	Arabidopsis thaliana	OXFORD_NANOPORE MinION	SAMC477348
Run accession	Run alias		Run data file information
CRR337270	mtb_Rep1_Run		File: CRR337270.tar.gz
CRX289364	fip37_Rep3	Arabidopsis thaliana	OXFORD_NANOPORE MinION	SAMC477347
Run accession	Run alias		Run data file information
CRR337269	fip37_Rep3_Run		File: CRR337269.tar.gz
CRX289363	fip37_Rep2	Arabidopsis thaliana	OXFORD_NANOPORE MinION	SAMC477346
Run accession	Run alias		Run data file information
CRR337268	fip37_Rep2_Run		File: CRR337268.tar.gz
CRX289362	fip37_Rep1	Arabidopsis thaliana	OXFORD_NANOPORE MinION	SAMC477345
Run accession	Run alias		Run data file information
CRR337267	fip37_Rep1_Run		File: CRR337267.tar.gz
CRX289361	Col0_Rep3	Arabidopsis thaliana	OXFORD_NANOPORE MinION	SAMC477344
Run accession	Run alias		Run data file information
CRR337266	Col0_Rep3_Run		File: CRR337266.tar.gz
CRX289360	Col0_Rep2	Arabidopsis thaliana	OXFORD_NANOPORE MinION	SAMC477343
Run accession	Run alias		Run data file information
CRR337265	Col0_Rep2_Run		File: CRR337265.tar.gz
CRX289359	Col0_Rep1	Arabidopsis thaliana	OXFORD_NANOPORE MinION	SAMC477342
Run accession	Run alias		Run data file information
CRR337264	Col0_Rep1_Run		File: CRR337264.tar.gz

Submitter:xuan li (lixuan@cemps.ac.cn)

Organization:CAS Center for Excellence in Molecular Plant Sciences / Institute of Plant Physiology and Ecology

Date submitted:2021-11-05