| Accession | CRX295908 |
| Organism | Severe acute respiratory syndrome coronavirus 2 |
| Accession in Other Database |
NCBI: SRX13241111 |
| Title | CERI-KRISP-K032317 - NGS-SA-Omicron SARS-CoV-2 sequencing in South Africa |
| BioProject | PRJCA007411 |
| BioSample | SAMC496181 |
| Platform | OXFORD_NANOPORE GridION |
| Library |
| Library name |
Construction protocol |
Strategy |
Source |
Selection |
Layout |
| CERI-KRISP-K032317 |
Amplicons were generated using the ARTIC PCR tiling method. Libraries were prepared using the Ligation Sequencing kit and method using the 96 plate barcodes. Libraries were run on the Oxford Nanopore GridION. |
AMPLICON |
VIRAL RNA |
RT-PCR |
SINGLE
|
|
| Processing |
Planned read length (bp) for mate 1: 160
Planned read length (bp) for mate 2: 160
|
| Release date | 2021-12-01 |
|---|
| Run |
| Run accession |
Run data file information |
| File name | File size (MB) |
|---|
| CRR344788 |
CRR344788.sra
|
5.84
|
|
| Submitter | This record was originated from NCBI and submitted by NGDC. |
|---|
| Organization | KwaZulu-Natal Research Innovation and Sequencing Platform-UKZN |
|---|
| Date submitted | 2021-12-01 |
|---|
