Experiment information
Accession CRX296039
Organism Severe acute respiratory syndrome coronavirus 2
Accession in Other Database NCBI: SRX13241162
Title CERI-KRISP-K032232 - NGS-SA Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Omicron sequencing in South Africa
BioProject PRJCA007411
BioSample SAMC496135
Platform Illumina MiSeq
Library
Library name Construction protocol Strategy Source Selection Layout
CERI-KRISP-K032232 Amplicons were generated using the ARTIC PCR tiling method. Libraries were prepared using the Nextera Flex DNA Library Preparation method using Illumina Nextera DNA CD Indexes. Libraries were run on the Illumina Miseq. AMPLICON VIRAL RNA RT-PCR PAIRED
Processing Planned read length (bp) for mate 1: 160
Planned read length (bp) for mate 2: 160
Release date2021-12-01
Run
Run accession Release date Run data file information
File nameFile size (MB)
CRR344716 2021-12-01 SRR17051946.sra 36.91
SubmitterThis record was originated from NCBI and submitted by NGDC.
OrganizationKwaZulu-Natal Research Innovation and Sequencing Platform-UKZN
Date submitted2021-12-01
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