| Accession | CRX328064 |
| Organism | Solanum tuberosum |
| Title | Ultralong Nanopore sequencing of potato: C88 |
| BioProject | PRJCA007997 |
| BioSample | SAMC586267 |
| Platform | OXFORD_NANOPORE PromethION |
| Library |
| Library name |
Construction protocol |
Strategy |
Source |
Selection |
Layout |
|
The high-molecular-weight DNA was extracted from in vitro seedlings based on the Oxford Nanopore's ''1D gDNA selection for long reads'' protocol. The library was constructed using LSK108 kit and sequenced using 9 R9.4 flow cells on the Nanopore PromethION sequencer. The base calling was perfromed using Guppy. |
WGS |
GENOMIC |
size fractionation |
SINGLE
|
|
| Processing |
|
| Release date | 2022-04-20 |
|---|
| Run |
| Run accession |
Run data file information |
| File name | File size (MB) |
|---|
| CRR381048 |
CRR381048.fastq.gz
|
13,844.36
|
| CRR381049 |
CRR381049.fastq.gz
|
7,362.94
|
| CRR381050 |
CRR381050.fastq.gz
|
37,793.59
|
| CRR381051 |
CRR381051.fastq.gz
|
25,916.27
|
| CRR381052 |
CRR381052.fastq.gz
|
17,888.74
|
| CRR381053 |
CRR381053.fastq.gz
|
19,041.77
|
| CRR381054 |
CRR381054.fastq.gz
|
5,215.99
|
| CRR381055 |
CRR381055.fastq.gz
|
7,684.24
|
| CRR381056 |
CRR381056.fastq.gz
|
5,188.49
|
|
| Submitter | Zhigui Bao (baozhigui@caas.cn) |
|---|
| Organization | Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences |
|---|
| Date submitted | 2022-02-07 |
|---|
