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CRA006075 Information
Title: De novo genome assembly of Muscovy duck
BioProject: PRJCA007991 /
Release date: 2024-02-15
Files: 143
File size: 678.10 GB
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Experiments & Runs
Experiment accession Title Taxon name Platform Sample accession
CRX409276 Mus.1.RNA Cairina moschata DNBSEQ-T7 SAMC738745
Run accession Run alias Run data file information
CRR468225 Mus.1.RNA File: CRR468225_f1.fq.gz
File: CRR468225_r2.fq.gz
CRX409275 Mus.1.ATAC Cairina moschata Illumina HiSeq 4000 SAMC738744
Run accession Run alias Run data file information
CRR468222 Mus.1.ATAC-1 File: CRR468222_f1.fq.gz
File: CRR468222_r2.fq.gz
CRR468223 Mus.1.ATAC-2 File: CRR468223_f1.fq.gz
File: CRR468223_r2.fq.gz
CRR468224 Mus.1.ATAC-3 File: CRR468224_f1.fq.gz
File: CRR468224_r2.fq.gz
CRX409274 Mus.1.HiC Cairina moschata DNBSEQ-T7 SAMC738743
Run accession Run alias Run data file information
CRR468212 Mus.1.HiC-1 File: CRR468212_f1.fq.gz
File: CRR468212_r2.fq.gz
CRR468213 Mus.1.HiC-2 File: CRR468213_f1.fq.gz
File: CRR468213_r2.fq.gz
CRR468214 Mus.1.HiC-3 File: CRR468214_f1.fq.gz
File: CRR468214_r2.fq.gz
CRR468215 Mus.1.HiC-4 File: CRR468215_f1.fq.gz
File: CRR468215_r2.fq.gz
CRR468216 Mus.1.HiC-5 File: CRR468216_f1.fq.gz
File: CRR468216_r2.fq.gz
CRR468217 Mus.1.HiC-6 File: CRR468217_f1.fq.gz
File: CRR468217_r2.fq.gz
CRR468218 Mus.1.HiC-7 File: CRR468218_f1.fq.gz
File: CRR468218_r2.fq.gz
CRR468219 Mus.1.HiC-8 File: CRR468219_f1.fq.gz
File: CRR468219_r2.fq.gz
CRR468220 Mus.1.HiC-9 File: CRR468220_f1.fq.gz
File: CRR468220_r2.fq.gz
CRR468221 Mus.1.HiC-10 File: CRR468221_f1.fq.gz
File: CRR468221_r2.fq.gz
CRX331713 Mus_Nanopore Cairina moschata OXFORD_NANOPORE GridION SAMC590321
Run accession Run alias Run data file information
CRR385214 Mus_Nanopore-1 File: CRR385214.fastq.gz
CRR385215 Mus_Nanopore-2 File: CRR385215.fastq.gz
CRR385216 Mus_Nanopore-3 File: CRR385216.fastq.gz
CRR385217 Mus_Nanopore-4 File: CRR385217.fastq.gz
CRR385218 Mus_Nanopore-5 File: CRR385218.fastq.gz
CRR385219 Mus_Nanopore-6 File: CRR385219.fastq.gz
CRR385220 Mus_Nanopore-7 File: CRR385220.fastq.gz
CRR385221 Mus_Nanopore-8 File: CRR385221.fastq.gz
CRR385222 Mus_Nanopore-9 File: CRR385222.fastq.gz
CRR385223 Mus_Nanopore-10 File: CRR385223.fastq.gz
CRR385224 Mus_Nanopore-11 File: CRR385224.fastq.gz
CRR385225 Mus_Nanopore-12 File: CRR385225.fastq.gz
CRR385226 Mus_Nanopore-13 File: CRR385226.fastq.gz
CRR385227 Mus_Nanopore-14 File: CRR385227.fastq.gz
CRR385228 Mus_Nanopore-15 File: CRR385228.fastq.gz
CRX331712 Mus_10X Cairina moschata Illumina HiSeq X Ten SAMC590320
Run accession Run alias Run data file information
CRR385182 Mus_10X-1 File: CRR385182_f1.fq.gz
File: CRR385182_r2.fq.gz
CRR385183 Mus_10X-2 File: CRR385183_f1.fq.gz
File: CRR385183_r2.fq.gz
CRR385184 Mus_10X-3 File: CRR385184_f1.fq.gz
File: CRR385184_r2.fq.gz
CRR385185 Mus_10X-4 File: CRR385185_f1.fq.gz
File: CRR385185_r2.fq.gz
CRR385186 Mus_10X-5 File: CRR385186_f1.fq.gz
File: CRR385186_r2.fq.gz
CRR385187 Mus_10X-6 File: CRR385187_f1.fq.gz
File: CRR385187_r2.fq.gz
CRR385188 Mus_10X-7 File: CRR385188_f1.fq.gz
File: CRR385188_r2.fq.gz
CRR385189 Mus_10X-8 File: CRR385189_f1.fq.gz
File: CRR385189_r2.fq.gz
CRR385190 Mus_10X-9 File: CRR385190_f1.fq.gz
File: CRR385190_r2.fq.gz
CRR385191 Mus_10X-10 File: CRR385191_f1.fq.gz
File: CRR385191_r2.fq.gz
CRR385192 Mus_10X-11 File: CRR385192_f1.fq.gz
File: CRR385192_r2.fq.gz
CRR385193 Mus_10X-12 File: CRR385193_f1.fq.gz
File: CRR385193_r2.fq.gz
CRR385194 Mus_10X-13 File: CRR385194_f1.fq.gz
File: CRR385194_r2.fq.gz
CRR385195 Mus_10X-14 File: CRR385195_f1.fq.gz
File: CRR385195_r2.fq.gz
CRR385196 Mus_10X-15 File: CRR385196_f1.fq.gz
File: CRR385196_r2.fq.gz
CRR385197 Mus_10X-16 File: CRR385197_f1.fq.gz
File: CRR385197_r2.fq.gz
CRR385198 Mus_10X-17 File: CRR385198_f1.fq.gz
File: CRR385198_r2.fq.gz
CRR385199 Mus_10X-18 File: CRR385199_f1.fq.gz
File: CRR385199_r2.fq.gz
CRR385200 Mus_10X-19 File: CRR385200_f1.fq.gz
File: CRR385200_r2.fq.gz
CRR385201 Mus_10X-20 File: CRR385201_f1.fq.gz
File: CRR385201_r2.fq.gz
CRR385202 Mus_10X-21 File: CRR385202_f1.fq.gz
File: CRR385202_r2.fq.gz
CRR385203 Mus_10X-22 File: CRR385203_f1.fq.gz
File: CRR385203_r2.fq.gz
CRR385204 Mus_10X-23 File: CRR385204_f1.fq.gz
File: CRR385204_r2.fq.gz
CRR385205 Mus_10X-24 File: CRR385205_f1.fq.gz
File: CRR385205_r2.fq.gz
CRR385206 Mus_10X-25 File: CRR385206_f1.fq.gz
File: CRR385206_r2.fq.gz
CRR385207 Mus_10X-26 File: CRR385207_f1.fq.gz
File: CRR385207_r2.fq.gz
CRR385208 Mus_10X-27 File: CRR385208_f1.fq.gz
File: CRR385208_r2.fq.gz
CRR385209 Mus_10X-28 File: CRR385209_f1.fq.gz
File: CRR385209_r2.fq.gz
CRR385210 Mus_10X-29 File: CRR385210_f1.fq.gz
File: CRR385210_r2.fq.gz
CRR385211 Mus_10X-30 File: CRR385211_f1.fq.gz
File: CRR385211_r2.fq.gz
CRR385212 Mus_10X-31 File: CRR385212_f1.fq.gz
File: CRR385212_r2.fq.gz
CRR385213 Mus_10X-32 File: CRR385213_f1.fq.gz
File: CRR385213_r2.fq.gz
CRX331711 Mus_mesencephalon Cairina moschata Illumina HiSeq 4000 SAMC590319
Run accession Run alias Run data file information
CRR385181 Mus_mesencephalon File: CRR385181_f1.fq.gz
File: CRR385181_r2.fq.gz
CRX331710 Mus_rectum Cairina moschata Illumina HiSeq 4000 SAMC590318
Run accession Run alias Run data file information
CRR385180 Mus_rectum File: CRR385180_f1.fq.gz
File: CRR385180_r2.fq.gz
CRX331709 Mus_eyes Cairina moschata Illumina HiSeq 4000 SAMC590317
Run accession Run alias Run data file information
CRR385179 Mus_eyes File: CRR385179_f1.fq.gz
File: CRR385179_r2.fq.gz
CRX331708 Mus_heart Cairina moschata Illumina HiSeq 4000 SAMC590316
Run accession Run alias Run data file information
CRR385178 Mus_heart File: CRR385178_f1.fq.gz
File: CRR385178_r2.fq.gz
CRX331707 Mus_cerebellar vermis Cairina moschata Illumina HiSeq 4000 SAMC590315
Run accession Run alias Run data file information
CRR385177 Mus_cerebellar cortex File: CRR385177_f1.fq.gz
File: CRR385177_r2.fq.gz
CRX331706 Mus_stomach Cairina moschata Illumina HiSeq 4000 SAMC590314
Run accession Run alias Run data file information
CRR385176 Mus_stomach File: CRR385176_f1.fq.gz
File: CRR385176_r2.fq.gz
CRX331705 Mus_kidney Cairina moschata Illumina HiSeq 4000 SAMC590313
Run accession Run alias Run data file information
CRR385175 Mus_kidney File: CRR385175_f1.fq.gz
File: CRR385175_r2.fq.gz
CRX331704 Mus_tongue Cairina moschata Illumina HiSeq 4000 SAMC590312
Run accession Run alias Run data file information
CRR385174 Mus_tongue File: CRR385174_f1.fq.gz
File: CRR385174_r2.fq.gz
CRX331703 Mus_spleen Cairina moschata Illumina HiSeq 4000 SAMC590311
Run accession Run alias Run data file information
CRR385173 Mus_spleen File: CRR385173_f1.fq.gz
File: CRR385173_r2.fq.gz
CRX331702 Mus_pons Cairina moschata Illumina HiSeq 4000 SAMC590310
Run accession Run alias Run data file information
CRR385172 Mus_pons File: CRR385172_f1.fq.gz
File: CRR385172_r2.fq.gz
CRX331701 Mus_striatum Cairina moschata Illumina HiSeq 4000 SAMC590309
Run accession Run alias Run data file information
CRR385171 Mus_striatum File: CRR385171_f1.fq.gz
File: CRR385171_r2.fq.gz
CRX331700 Mus_testis Cairina moschata Illumina HiSeq 4000 SAMC590308
Run accession Run alias Run data file information
CRR385170 Mus_testis File: CRR385170_f1.fq.gz
File: CRR385170_r2.fq.gz
CRX331699 Mus_liver Cairina moschata Illumina HiSeq 4000 SAMC590307
Run accession Run alias Run data file information
CRR385169 Mus_liver File: CRR385169_f1.fq.gz
File: CRR385169_r2.fq.gz
CRX331698 Mus_lung Cairina moschata Illumina HiSeq 4000 SAMC590306
Run accession Run alias Run data file information
CRR385168 Mus_lung File: CRR385168_f1.fq.gz
File: CRR385168_r2.fq.gz
CRX331697 Mus_cerebral cortex Cairina moschata Illumina HiSeq 4000 SAMC590305
Run accession Run alias Run data file information
CRR385167 Mus_cerebral cortex File: CRR385167_f1.fq.gz
File: CRR385167_r2.fq.gz
Submitter:Min-Sheng Peng (pengminsheng@mail.kiz.ac.cn)
Organization:Kunming Institute of Zoology, Chinese Academy of Sciences
Date submitted:2022-01-18