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实验基本信息
实验编号 CRX394641
物种名称 Pyricularia oryzae
标题 Sample 9
项目编号 PRJCA008908
样本编号 SAMC703630
测序平台 Illumina NovaSeq 6000
建库信息
文库名称 文库构建方法 建库策略 样品来源 实验选择 文库布局
Twenty milliliters of spore suspension (1 x 106 spores/ml) of the wild-type 70-15, the vrf1-deletion mutant, the hox7-deletion mutant, or the hox7 and vrf1 deletion mutant was inoculated on hydrophobic polyvinylchloride (PVC) films and incubated in a humidity chamber at 25 degrees Celsius for 5 h. Appressorial mRNAs in triplicate independently for each strain, were extracted and isolated using an RNeasy Plus Mini Kit (Qiagen, Germany). After RNA purification and library construction of the samples, next-generation sequencing technology (NGS) was used to perform paired-end (PE) sequencing in a 2 x 150 nt way on these libraries based on the Illumina HiSeq platform (NovaSeq 6000). The amount of data obtained by sequencing was 6 G/sample. RNA-Seq TRANSCRIPTOMIC PolyA PAIRED
处理信息 Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Insert size (bp): 450
发布日期2022-08-20
测序反应
Run编号 Run序列文件信息
File nameFile size (MB)
CRR452405 CRR452405_f1.fastq.gz
CRR452405_r2.fastq.gz
1,556.01
1,646.95
提交者Jianping Lu (jplu@zju.edu.cn)
所属单位Zhejiang University
提交日期2022-04-01