Experiment information
Accession CRX474698
Organism Jasminum sambac
Title calyx
BioProject PRJCA010780
BioSample SAMC827863
Platform Illumina HiSeq 2500
Library
Library name Construction protocol Strategy Source Selection Layout
Calyx Total RNA was extracted from flower buds, fully-opened flowers, pistils, petals, calyxes, and roots using the Plant Total RNA Isolation Kit (Biomarker, Bejing, China) and DNA contamination was eliminated by RNase-Free DNase I kit (Takara, Dalian, China). RNA was evaluated using the same method as with DNA. A fluorometer integrated and qualified RNA was used for cDNA library construction after testing with NanoDrop spectrophotometer and a Qubit 2.0. After the PCR products were purified, the library was assessed on the Agilent Bioanalyzer 2100. Assessed libraries were sequenced on Illumina HiSeq X Ten platform (Illumina, San Diego, CA, USA) according to the manufacturer’s instructions. RNA-Seq TRANSCRIPTOMIC unspecified PAIRED
Processing Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Release date2022-08-05
Run
Run accession Run data file information
File nameFile size (MB)
CRR535042 CRR535042_f1.fq.gz
CRR535042_r2.fq.gz
2,173.23
2,376.22
SubmitterMin Xu (xmplant@163.com)
OrganizationZhejiang University
Date submitted2022-07-26