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Experiment information
Accession CRX508599
Organism Mus musculus
Title scRNA_2_5M_2
BioProject PRJCA011963
BioSample SAMC898718
Platform Illumina NovaSeq 6000
Library
Library name Construction protocol Strategy Source Selection Layout
The prostates of TPPRC mice were dissected and minced with scissors. The dissociated prostate cells were resuspended in Red Blood Cell Lysis Solution (Miltenyi Biotec, no. 130-094-183) and incubated at room temperature for 2 min. Dead cells were removed with Dead Cell Removal Kit (Miltenyi Biotec, no. 130-090-101), and the cells were counted via the Countess II FL Automated Cell Counter (Thermo Fisher Scientific). Cells were lysed on ice for 5 min. Isolated nuclei from T2PPRC mouse prostates cells were transposed and loaded onto the Chromium Next GEM Chip J (10X Genomics). Then, the chip with prostate cells was loaded on a Chromium Controller. The library was constructed according to the manufacturer’s instructions. OTHER TRANSCRIPTOMIC SINGLE CELL PolyA PAIRED
Processing Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Insert size (bp): 400
Release date2022-10-04
Run
Run accession Run data file information
File nameFile size (MB)
CRR572811 CRR572811.tar.gz 68,490.77
SubmitterFei Li (lifei6@sibcb.ac.cn)
OrganizationCenter for Excellence in Molecular Cell Science/Shanghai Institute of Biochemistry and Cell Biology, Chinese Academy of Sciences
Date submitted2022-09-23