| Accession | CRX508781 |
| Organism | Cenchrus sp. Jujuncao |
| Title | Pgi-HiC-2 |
| BioProject | PRJCA011649 |
| BioSample | SAMC898961 |
| Platform | Illumina HiSeq 2000 |
| Library |
| Library name |
Construction protocol |
Strategy |
Source |
Selection |
Layout |
|
Sixteen-week old young leaves of P. giganteum were fixed and lysed, after which the cross-linked DNA was digested with MboI enzymes overnight. The enzymes were inactivated and cohesive ends were filled in by adding biotin-labelled dCTP. After proximity ligation in blunt-end ligation buffer, the cross-linking was reversed and DNA was purified for Hi-C library construction |
Hi-C |
GENOMIC |
unspecified |
PAIRED
|
|
| Processing |
Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
|
| Release date | 2023-05-25 |
|---|
| Run |
| Run accession |
Run data file information |
| File name | File size (MB) |
|---|
| CRR572994 |
CRR572994_f1.fq.gz
CRR572994_r2.fq.gz
|
20,854.71
22,146.37
|
|
| Submitter | Longsheng Xing (xingls@hbu.edu.cn) |
|---|
| Organization | Hebei University |
|---|
| Date submitted | 2022-09-24 |
|---|
