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Experiment information
Accession CRX543187
Organism Mus musculus
Title Basal scATAC-seq
BioProject PRJCA013081
BioSample SAMC987684
Platform Illumina NovaSeq 6000
Library
Library name Construction protocol Strategy Source Selection Layout
sorted basal cell suspension from 10-weeks mouse prostate was loaded on a well of 10x Chromium single cell instrument (10X Genomics). Barcoding, cDNA synthesis, DNA and library construction were administered ATAC-seq GENOMIC SINGLE CELL PCR PAIRED
Processing Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 400
Release date2024-11-09
Run
Run accession Run data file information
File nameFile size (MB)
CRR608412 CRR608412_f1.fastq.gz
CRR608412_r2.fastq.gz 		4,701.17
2,111.07
CRR608413 CRR608413_f1.fastq.gz
CRR608413_r2.fastq.gz 		1,032.06
4,962.72
CRR608414 CRR608414_f1.fastq.gz
CRR608414_r2.fastq.gz 		5,110.88
2,307.39
CRR608415 CRR608415_f1.fastq.gz
CRR608415_r2.fastq.gz 		1,022.81
5,386.13
CRR608416 CRR608416_f1.fastq.gz
CRR608416_r2.fastq.gz 		3,920.61
1,746.09
CRR608417 CRR608417_f1.fastq.gz
CRR608417_r2.fastq.gz 		813.6
4,100.86
CRR608418 CRR608418_f1.fastq.gz
CRR608418_r2.fastq.gz 		4,903.57
2,214.59
CRR608419 CRR608419_f1.fastq.gz
CRR608419_r2.fastq.gz 		1,012.19
5,162.27
Submitterlin li (lilin6@sibcb.ac.cn)
OrganizationShanghai Institute of Biochemistry and Cell Biology, Chinese Academy of Sciences
Date submitted2022-11-09
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