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Experiment information
Accession CRX582848
Organism Santalum album
Title TX1_3
BioProject PRJCA014873
BioSample SAMC1090447
Platform Illumina HiSeq X Ten
Library
Library name Construction protocol Strategy Source Selection Layout
The cross-linked DNA was digested with MboI endonuclease overnight. The sticky ends of the digested fragments were biotinylated, diluted, and ligated to each other randomly to form chimeric junctions. Following ligation, a protease was used to remove the crosslinks and DNA was purified using Qiagen MinElute PCR Purification Kit. Finally, the Hi-C library with 350 bp insert size was constructed and sequenced on BGISEQ-500 sequencer with PE150. WGS GENOMIC RANDOM PAIRED
Processing Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Release date2023-10-10
Run
Run accession Run data file information
File nameFile size (MB)
CRR651506 CRR651506_f1.fq.gz
CRR651506_r2.fq.gz 		3,666.25
3,760.79
CRR651507 CRR651507_f1.fq.gz
CRR651507_r2.fq.gz 		3,195.41
3,299.19
CRR651508 CRR651508_f1.fq.gz
CRR651508_r2.fq.gz 		3,302.13
3,380.5
CRR651509 CRR651509_f1.fq.gz
CRR651509_r2.fq.gz 		4,111.98
4,239.91
CRR651510 CRR651510_f1.fq.gz
CRR651510_r2.fq.gz 		4,167.04
4,285.83
CRR651511 CRR651511_f1.fq.gz
CRR651511_r2.fq.gz 		2,529.25
2,600.4
CRR651512 CRR651512_f1.fq.gz
CRR651512_r2.fq.gz 		3,625.04
3,736.72
CRR651513 CRR651513_f1.fq.gz
CRR651513_r2.fq.gz 		3,138.5
3,206.34
SubmitterXinhua Zhang (xhzhang@scib.ac.cn)
OrganizationSouth China Botanical Garden
Date submitted2023-02-10
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