| Accession | CRX641863 |
| Organism | Brassica juncea |
| Title | Hi-C sequencing of XC |
| BioProject | PRJCA015688 |
| BioSample | SAMC1164176 |
| Platform | Illumina NovaSeq 6000 |
| Library |
| Library name |
Construction protocol |
Strategy |
Source |
Selection |
Layout |
|
The sample was fixed with formaldehyde, and DNA was enzymically cut by restriction enzyme to produce sticky ends on both sides of the crosslinking. Biotin-labeled bases were introduced, the end-repaired DNA was cyclized, DNA was decrosslinked, DNA was purified, and DNA was broken into fragments of 300 bp-700 bp. The DNA fragments containing interaction relationships were captured by the magnetic beads of strand avidin for library construction. |
Hi-C |
GENOMIC |
Restriction Digest |
PAIRED
|
|
| Processing |
Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
|
| Release date | 2025-05-10 |
|---|
| Run |
| Run accession |
Run data file information |
| File name | File size (MB) |
|---|
| CRR716887 |
CRR716887_f1.fq.gz
CRR716887_r2.fq.gz
|
19,303.07
19,616.14
|
|
| Submitter | Shuangping Heng (shuangpingheng@126.com) |
|---|
| Organization | Xinyang normal university |
|---|
| Date submitted | 2023-03-23 |
|---|
