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CRA011710 基本信息
标题: Decoding the genomic landscape of chromatin-associated biomolecular condensates (mESC)
项目编号: PRJCA018079 /
发布日期: 2024-06-24
文件个数: 82
文件大小: 447.24 GB
出版信息
杂志名称
Nature Communications
发表年份
2024
Doi
10.1038/s41467-024-51426-2
PubMed ID
39138204

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元数据信息:
文件:
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Experiments和Runs信息
实验编号 实验名称 物种名称 测序平台 样本编号
CRX1007850 Single-cell RNA-seq (10x) in 1,6-HD-treated mESC Mus musculus Illumina NovaSeq 6000 SAMC3487608
Run编号 Run别名 Run序列文件信息
CRR1095334 mESC_16HD_scRNA-seq_batchR1 File: CRR1095334_f1.fastq.gz
File: CRR1095334_r2.fastq.gz
CRX1007849 Single-cell RNA-seq (10x) in 2,5-HD-treated mESC Mus musculus Illumina NovaSeq 6000 SAMC3487607
Run编号 Run别名 Run序列文件信息
CRR1095333 mESC_25HD_scRNA-seq_batchR1 File: CRR1095333_f1.fastq.gz
File: CRR1095333_r2.fastq.gz
CRX1007848 CUT&RUN data for CTR9 in 1,6-HD-treated mESC (replicate 2) Mus musculus Illumina NovaSeq 6000 SAMC3487606
Run编号 Run别名 Run序列文件信息
CRR1095332 mESC_16HD_CTR9_rep2_batchR1 File: CRR1095332_f1.fastq.gz
File: CRR1095332_r2.fastq.gz
CRX1007847 CUT&RUN data for CTR9 in 1,6-HD-treated mESC (replicate 1) Mus musculus Illumina NovaSeq 6000 SAMC3487605
Run编号 Run别名 Run序列文件信息
CRR1095331 mESC_16HD_CTR9_rep1_batchR1 File: CRR1095331_f1.fastq.gz
File: CRR1095331_r2.fastq.gz
CRX1007846 CUT&RUN data for CTR9 in 2,5-HD-treated mESC (replicate 2) Mus musculus Illumina NovaSeq 6000 SAMC3487604
Run编号 Run别名 Run序列文件信息
CRR1095330 mESC_25HD_CTR9_rep2_batchR1 File: CRR1095330_f1.fastq.gz
File: CRR1095330_r2.fastq.gz
CRX1007845 CUT&RUN data for CTR9 in 2,5-HD-treated mESC (replicate 1) Mus musculus Illumina NovaSeq 6000 SAMC3487603
Run编号 Run别名 Run序列文件信息
CRR1095329 mESC_25HD_CTR9_rep1_batchR1 File: CRR1095329_f1.fastq.gz
File: CRR1095329_r2.fastq.gz
CRX1007844 CUT&RUN data for CTR9 in wild type mESC (replicate 2) Mus musculus Illumina NovaSeq 6000 SAMC3487602
Run编号 Run别名 Run序列文件信息
CRR1095328 mESC_WT_CTR9_rep2_batchR1 File: CRR1095328_f1.fastq.gz
File: CRR1095328_r2.fastq.gz
CRX1007843 CUT&RUN data for CTR9 in wild type mESC (replicate 1) Mus musculus Illumina NovaSeq 6000 SAMC3487601
Run编号 Run别名 Run序列文件信息
CRR1095327 mESC_WT_CTR9_rep1_batchR1 File: CRR1095327_f1.fastq.gz
File: CRR1095327_r2.fastq.gz
CRX1007842 CUT&RUN data for ELL3 in 1,6-HD-treated mESC (replicate 2) Mus musculus Illumina NovaSeq 6000 SAMC3487600
Run编号 Run别名 Run序列文件信息
CRR1095326 mESC_16HD_ELL3_rep2_batchR1 File: CRR1095326_f1.fastq.gz
File: CRR1095326_r2.fastq.gz
CRX1007841 CUT&RUN data for ELL3 in 1,6-HD-treated mESC (replicate 1) Mus musculus Illumina NovaSeq 6000 SAMC3487599
Run编号 Run别名 Run序列文件信息
CRR1095325 mESC_16HD_ELL3_rep1_batchR1 File: CRR1095325_f1.fastq.gz
File: CRR1095325_r2.fastq.gz
CRX1007840 CUT&RUN data for ELL3 in 2,5-HD-treated mESC (replicate 3) Mus musculus Illumina NovaSeq 6000 SAMC3487598
Run编号 Run别名 Run序列文件信息
CRR1095324 mESC_25HD_ELL3_rep3_batchR1 File: CRR1095324_f1.fastq.gz
File: CRR1095324_r2.fastq.gz
CRX1007839 CUT&RUN data for ELL3 in 2,5-HD-treated mESC (replicate 2) Mus musculus Illumina NovaSeq 6000 SAMC3487597
Run编号 Run别名 Run序列文件信息
CRR1095323 mESC_25HD_ELL3_rep2_batchR1 File: CRR1095323_f1.fastq.gz
File: CRR1095323_r2.fastq.gz
CRX1007838 CUT&RUN data for ELL3 in 2,5-HD-treated mESC (replicate 1) Mus musculus Illumina NovaSeq 6000 SAMC3487596
Run编号 Run别名 Run序列文件信息
CRR1095322 mESC_25HD_ELL3_rep1_batchR1 File: CRR1095322_f1.fastq.gz
File: CRR1095322_r2.fastq.gz
CRX1007837 CUT&RUN data for ELL3 in wild type mESC (replicate 2) Mus musculus Illumina NovaSeq 6000 SAMC3487595
Run编号 Run别名 Run序列文件信息
CRR1095321 mESC_WT_ELL3_rep2_batchR1 File: CRR1095321_f1.fastq.gz
File: CRR1095321_r2.fastq.gz
CRX1007836 CUT&RUN data for ELL3 in wild type mESC (replicate 1) Mus musculus Illumina NovaSeq 6000 SAMC3487594
Run编号 Run别名 Run序列文件信息
CRR1095320 mESC_WT_ELL3_rep1_batchR1 File: CRR1095320_f1.fastq.gz
File: CRR1095320_r2.fastq.gz
CRX1007835 CUT&RUN data for EP300 in 1,6-HD-treated mESC (replicate 2) Mus musculus Illumina NovaSeq 6000 SAMC3487593
Run编号 Run别名 Run序列文件信息
CRR1095319 mESC_16HD_EP300_rep2_batchR1 File: CRR1095319_f1.fastq.gz
File: CRR1095319_r2.fastq.gz
CRX1007834 CUT&RUN data for EP300 in 1,6-HD-treated mESC (replicate 1) Mus musculus Illumina NovaSeq 6000 SAMC3487592
Run编号 Run别名 Run序列文件信息
CRR1095318 mESC_16HD_EP300_rep1_batchR1 File: CRR1095318_f1.fastq.gz
File: CRR1095318_r2.fastq.gz
CRX1007833 CUT&RUN data for EP300 in 2,5-HD-treated mESC (replicate 2) Mus musculus Illumina NovaSeq 6000 SAMC3487591
Run编号 Run别名 Run序列文件信息
CRR1095317 mESC_25HD_EP300_rep2_batchR1 File: CRR1095317_f1.fastq.gz
File: CRR1095317_r2.fastq.gz
CRX1007832 CUT&RUN data for EP300 in 2,5-HD-treated mESC (replicate 1) Mus musculus Illumina NovaSeq 6000 SAMC3487590
Run编号 Run别名 Run序列文件信息
CRR1095316 mESC_25HD_EP300_rep1_batchR1 File: CRR1095316_f1.fastq.gz
File: CRR1095316_r2.fastq.gz
CRX1007831 CUT&RUN data for EP300 in wild type mESC (replicate 2) Mus musculus Illumina NovaSeq 6000 SAMC3487589
Run编号 Run别名 Run序列文件信息
CRR1095315 mESC_WT_EP300_rep2_batchR1 File: CRR1095315_f1.fastq.gz
File: CRR1095315_r2.fastq.gz
提交者:Yong Zhang (yzhang@tongji.edu.cn)
所属单位:Tongji University
提交日期:2023-07-03