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Experiment information
Accession CRX766191
Organism Crypthecodinium sp.
Title T35-2
BioProject PRJCA019147
BioSample SAMC3008334
Platform Illumina NovaSeq 6000
Library
Library name Construction protocol Strategy Source Selection Layout
For comparative transcriptome sequencing, the cells were cultured under modified By+ medium for 24 h, and resuspended in nitrogen-free medium afterwards and cultured under 15ºC, 20ºC, 30ºC and 35 ºC, respectively. After induction for 24 h, samples were harvested at 4ºC and rapidly frozen in liquid nitrogen. The cells were ground with the aid of liquid nitrogen, the RNAiso plus reagent. was used to extract total RNA. The concentration of RNA was measured with Nanodrop 2000. About 14 μg of RNA was used to synthesize cDNA using the cDNA synthesis kit. RNA-Seq TRANSCRIPTOMIC RT-PCR PAIRED
Processing Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Insert size (bp): 400
Release date2023-08-22
Run
Run accession Run data file information
File nameFile size (MB)
CRR850037 CRR850037_f1.fastq.gz
CRR850037_r2.fastq.gz
1,558.5
1,592.16
Submitterzhongxiang Fu (fuzhongxiangsmd@163.com)
OrganizationHebei University
Date submitted2023-08-21