| Accession | CRX791070 |
| Organism | Brassica rapa var. purpuraria |
| Title | HongShanCaiTai HiC |
| BioProject | PRJCA019480 |
| BioSample | SAMC3057464 |
| Platform | Illumina NovaSeq 6000 |
| Library |
| Library name |
Construction protocol |
Strategy |
Source |
Selection |
Layout |
|
the plant materials were fixed in NIB buffer and then lysed by 1.0% of SDS in Triton X-100. The DNA in the nuclei was digested by endonuclease DpnII (NEB). The blunt ends of digested DNA were labelled by Biotin-14-dATP (TriLINK Biotechnologies, USA). Then the samples were deproteinized with proteinase K (Thermo Fisher Scientific, USA) and purified using QIAamp DNA Mini Kit (Qiagen, USA) |
Hi-C |
GENOMIC |
PCR |
PAIRED
|
|
| Processing |
Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
|
| Release date | 2024-03-29 |
|---|
| Run |
| Run accession |
Run data file information |
| File name | File size (MB) |
|---|
| CRR875505 |
CRR875505_f1.fq.gz
CRR875505_r2.fq.gz
|
24,679.88
25,074.72
|
|
| Submitter | Yifan Zhou (117711731@qq.com) |
|---|
| Organization | Wuhan University |
|---|
| Date submitted | 2023-09-12 |
|---|
