| Accession | CRX824639 |
| Organism | Bacteria |
| Title | Raw 16S rRNA gene sequencing data of S. putrefaciens-R. palustris co-culture with Fe redox communication cultured for 8 day |
| BioProject | PRJCA020292 |
| BioSample | SAMC3093963 |
| Platform | Illumina MiSeq |
| Library |
| Library name |
Construction protocol |
Strategy |
Source |
Selection |
Layout |
|
V3 and V4 regions of 16S rRNA were amplified by PCR with primers of 341F:5'-CCTA CGGG NGGC WGCA G-3' and 805R: 5'-GACT ACHV GGGT ATCT AATC C-3'. The amplified DNA was then processed for gene sequencing with Illumina MiSeq-PE250 system. QIIME2 was adopted to analyze the gene sequences and classify the operational taxonomic units (OTUs) on the basis of 97% sequence identity. |
AMPLICON |
OTHER |
PCR |
PAIRED
|
|
| Processing |
Planned read length (bp) for mate 1: 250
Planned read length (bp) for mate 2: 250
|
| Release date | 2023-10-07 |
|---|
| Run |
| Run accession |
Run data file information |
| File name | File size (MB) |
|---|
| CRR911473 |
CRR911473_f1.fastq.gz
CRR911473_r2.fastq.gz
|
8.84
9.28
|
|
| Submitter | Na Chen (chenna0804@whu.edu.cn) |
|---|
| Organization | Wuhan University |
|---|
| Date submitted | 2023-10-07 |
|---|
