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Experiment information
Accession CRX963505
Organism Oryza longistaminata
Title OlAP3
BioProject PRJCA023651
BioSample SAMC3374344
Platform Illumina NovaSeq 6000
Library
Library name Construction protocol Strategy Source Selection Layout
The starting RNA of the library was total RNA. mRNA with polyA tail was enriched by Oligo(dT) magnetic beads, and then the mRNA was randomly interrupted by divalent cations in Fragmentation Buffer. Using fragmented mRNA as template and random oligonucleotides as primer, the first cDNA strand was synthesized in M-MuLV reverse transcriptase system, then the RNA strand was degraded by RNaseH, and the second cDNA strand was synthesized in DNA polymerase I system using dNTPs as raw material. The purified double-stranded cDNA was end-repaired, A-tail was added, and sequencing joints were connected. cDNA of about 370~420 bp was screened by AMPure XP beads for PCR amplification, and PCR products were purified by AMPure XP beads again. Finally, A library was obtained. RNA-Seq TRANSCRIPTOMIC PCR PAIRED
Processing Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Release date2024-02-21
Run
Run accession Run data file information
File nameFile size (MB)
CRR1055774 CRR1055774_f1.fq.gz
CRR1055774_r2.fq.gz
1,532.73
1,583.73
SubmitterXiaosong Peng (pxs63@163.com)
OrganizationJiangxi Agricultural University
Date submitted2024-02-19