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Experiment information
Accession CRX990853
Organism Mus musculus
Title neu1
BioProject PRJCA024387
BioSample SAMC3447480
Platform Illumina NovaSeq 6000
Library
Library name Construction protocol Strategy Source Selection Layout
We isolated and cultured MACS-sorted Ly6G+ neutrophils from mouse blood with/without MB49 cells cocultivation.The neutrophils without MB49 cells cocultivation were numbered neu1, neu2, neu3; and neutrophils with MB49 cells cocultivation were numbered coculture1, coculture2, coculture3. Total RNA was extracted using TRIzol reagent kit (thermofisher) according to the manufacturer’s protocol. RNA quality was assessed on a NanoDrop ND-1000 (NanoDrop, Wilmington, DE, USA) and a Bioanalyzer 2100 (Agilent, CA, USA). After eukaryotic mRNA was enriched and reversely transcripted into cDNA, the cDNA fragments were purified and ligated to Illumina sequencing adapters and were sequenced on the illumina NovaseqTM 6000 . RNA-Seq TRANSCRIPTOMIC PolyA PAIRED
Processing Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Release date2024-04-25
Run
Run accession Run data file information
File nameFile size (MB)
CRR1084581 CRR1084581_f1.fq.gz
CRR1084581_r2.fq.gz
1,258.2
1,322.32
SubmitterWeiqiang Jing (wjing1@sdu.edu.cn)
OrganizationQilu Hospital of Shandong University
Date submitted2024-03-19
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