| Accession | CRX1007454 |
| Organism | Ammopiptanthus mongolicus |
| Title | Am_HiC |
| BioProject | PRJCA024714 |
| BioSample | SAMC3484613 |
| Platform | Illumina HiSeq 4000 |
| Library |
| Library name |
Construction protocol |
Strategy |
Source |
Selection |
Layout |
|
2 g of young leaves of 2-month-old A. mongolicus was cross-linked with 40 mL of 2% formaldehyde at room temperature for 15 min, and then quenched by adding 4.324 mL of 2.5 M glycine. A Hi-C library was constructed according to the method described by Shi et al. (2019). DNA was digested overnight with a 4-bp cutter restriction enzyme (400 units of MboI) at 37C on a rocking platform. Hi-C libraries were amplified by 1012 cycles of PCR. |
Hi-C |
GENOMIC |
Restriction Digest |
PAIRED
|
|
| Processing |
Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
|
| Release date | 2024-04-03 |
|---|
| Run |
| Run accession |
Run data file information |
| File name | File size (MB) |
|---|
| CRR1094825 |
CRR1094825_f1.fq.gz
CRR1094825_r2.fq.gz
|
26,724.84
27,294.19
|
|
| Submitter | Jiacheng Zhang (zhangjc@link.cuhk.edu.hk) |
|---|
| Organization | The Chinese University of Hong Kong |
|---|
| Date submitted | 2024-04-01 |
|---|
