| 实验编号 | CRX1022846 |
| 物种名称 | Gorilla gorilla gorilla |
| 标题 | EBJC_CTCF_ChIP-seq _replicate 1 |
| 项目编号 | PRJCA020156 |
| 样本编号 | SAMC3516681 |
| 测序平台 | Illumina NovaSeq 6000 |
| 建库信息 |
| 文库名称 |
文库构建方法 |
建库策略 |
样品来源 |
实验选择 |
文库布局 |
|
EBJC cells were crosslinked and sonicated using the Covaris truChIP-seq chromatin shearing kit (Covaris, Cat. No. 520154). Sixty µg sheared chromatin (corresponding to ten million cells) was incubated overnight with five µg antibodies against CTCF coated on protein-G beads. The enriched DNA was eluted from the protein-G beads, column purified, and then end-repaired, ligated to index adapters, and PCR-amplified with ultralow V2 DNA-seq library preparation kit (Nugen, Cat. No. 0344NB) to construct libraries for sequencing. |
ChIP-Seq |
GENOMIC |
ChIP |
PAIRED
|
|
| 处理信息 |
Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
|
| 发布日期 | 2024-12-12 |
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| 测序反应 |
| Run编号 |
Run序列文件信息 |
| File name | File size (MB) |
|---|
| CRR1113470 |
CRR1113470_f1.fq.gz
CRR1113470_r2.fq.gz
|
2,342.7
2,608.35
|
|
| 提交者 | Zhonghui Tang (tangzhh99@mail.sysu.edu.cn) |
|---|
| 所属单位 | Sun Yat-sen University |
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| 提交日期 | 2024-04-16 |
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