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CRA016775 基本信息
标题: Chromosome-Scale Haploid Genome Assembly of the Durian cultivar 'Kan Yao'
项目编号: PRJCA026560 /
发布日期: 2024-06-29
文件个数: 87
文件大小: 773.36 GB
出版信息
杂志名称
Scientific Data
发表年份
2025
Doi
10.1038/s41597-025-04656-y
PubMed ID
40044694

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元数据信息:
文件:
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Experiments和Runs信息
实验编号 实验名称 物种名称 测序平台 样本编号
CRX1077262 Iso-Seq_SL Durio zibethinus Pacbio Sequel II SAMC3768476
Run编号 Run别名 Run序列文件信息
CRR1170212 Iso-Seq_SL File: CRR1170212.bam
CRX1077261 Iso-Seq_stalk Durio zibethinus Pacbio Sequel II SAMC3768474
Run编号 Run别名 Run序列文件信息
CRR1170211 Iso-Seq_stalk File: CRR1170211.bam
CRX1077260 Iso-Seq_pulp Durio zibethinus Pacbio Sequel II SAMC3768470
Run编号 Run别名 Run序列文件信息
CRR1170209 Iso-Seq_pulp_1 File: CRR1170209.bam
CRR1170210 Iso-Seq_pulp_2 File: CRR1170210.bam
CRX1077259 Iso-Seq_seed Durio zibethinus Pacbio Sequel II SAMC3768468
Run编号 Run别名 Run序列文件信息
CRR1170208 Iso-Seq_seed File: CRR1170208.bam
CRX1077258 Iso-Seq_flower Durio zibethinus Pacbio Sequel II SAMC3768467
Run编号 Run别名 Run序列文件信息
CRR1170206 Iso-Seq_flower_1 File: CRR1170206.bam
CRR1170207 Iso-Seq_flower_2 File: CRR1170207.bam
CRX1077257 Iso-Seq_leaf Durio zibethinus Pacbio Sequel II SAMC3768465
Run编号 Run别名 Run序列文件信息
CRR1170205 Iso-Seq_leaf File: CRR1170205.bam
CRX1077256 Iso-Seq_stem Durio zibethinus Pacbio Sequel II SAMC3768466
Run编号 Run别名 Run序列文件信息
CRR1170204 run_Iso-Seq_stem File: CRR1170204.bam
CRX1077255 RNAseq_fruit_PFD_60d_SL Durio zibethinus Illumina HiSeq 2000 SAMC3768476
Run编号 Run别名 Run序列文件信息
CRR1170201 run_RNAseq_fruit_PFD_60d_SL_1 File: CRR1170201_f1.fq.gz
File: CRR1170201_r2.fq.gz
CRR1170202 run_RNAseq_fruit_PFD_60d_SL_2 File: CRR1170202_f1.fq.gz
File: CRR1170202_r2.fq.gz
CRR1170203 run_RNAseq_fruit_PFD_60d_SL_3 File: CRR1170203_f1.fq.gz
File: CRR1170203_r2.fq.gz
CRX1077254 RNAseq_fruit_PFD_30d_SL Durio zibethinus Illumina HiSeq 2000 SAMC3768475
Run编号 Run别名 Run序列文件信息
CRR1170198 run_RNAseq_fruit_PFD_30d_SL_1 File: CRR1170198_f1.fq.gz
File: CRR1170198_r2.fq.gz
CRR1170199 run_RNAseq_fruit_PFD_30d_SL_2 File: CRR1170199_f1.fq.gz
File: CRR1170199_r2.fq.gz
CRR1170200 run_RNAseq_fruit_PFD_30d_SL_3 File: CRR1170200_f1.fq.gz
File: CRR1170200_r2.fq.gz
CRX1077253 RNAseq_fruit_PFD_60d_stalk Durio zibethinus Illumina HiSeq 2000 SAMC3768474
Run编号 Run别名 Run序列文件信息
CRR1170195 run_RNAseq_fruit_PFD_60d_stalk_1 File: CRR1170195_f1.fq.gz
File: CRR1170195_r2.fq.gz
CRR1170196 run_RNAseq_fruit_PFD_60d_stalk_2 File: CRR1170196_f1.fq.gz
File: CRR1170196_r2.fq.gz
CRR1170197 run_RNAseq_fruit_PFD_60d_stalk_3 File: CRR1170197_f1.fq.gz
File: CRR1170197_r2.fq.gz
CRX1077252 RNAseq_fruit_PFD_30d_stalk Durio zibethinus Illumina HiSeq 2000 SAMC3768473
Run编号 Run别名 Run序列文件信息
CRR1170192 run_RNAseq_fruit_PFD_30d_stalk_1 File: CRR1170192_f1.fq.gz
File: CRR1170192_r2.fq.gz
CRR1170193 run_RNAseq_fruit_PFD_30d_stalk_2 File: CRR1170193_f1.fq.gz
File: CRR1170193_r2.fq.gz
CRR1170194 run_RNAseq_fruit_PFD_30d_stalk_3 File: CRR1170194_f1.fq.gz
File: CRR1170194_r2.fq.gz
CRX1077251 RNAseq_fruit_PFD_120d_pulp Durio zibethinus Illumina HiSeq 2000 SAMC3768472
Run编号 Run别名 Run序列文件信息
CRR1170189 run_RNAseq_fruit_PFD_120d_pulp_1 File: CRR1170189_f1.fq.gz
File: CRR1170189_r2.fq.gz
CRR1170190 run_RNAseq_fruit_PFD_120d_pulp_2 File: CRR1170190_f1.fq.gz
File: CRR1170190_r2.fq.gz
CRR1170191 run_RNAseq_fruit_PFD_120d_pulp_3 File: CRR1170191_f1.fq.gz
File: CRR1170191_r2.fq.gz
CRX1077250 RNAseq_fruit_PFD_60d_pulp Durio zibethinus Illumina HiSeq 2000 SAMC3768471
Run编号 Run别名 Run序列文件信息
CRR1170186 run_RNAseq_fruit_PFD_60d_pulp_1 File: CRR1170186_f1.fq.gz
File: CRR1170186_r2.fq.gz
CRR1170187 run_RNAseq_fruit_PFD_60d_pulp_2 File: CRR1170187_f1.fq.gz
File: CRR1170187_r2.fq.gz
CRR1170188 run_RNAseq_fruit_PFD_60d_pulp_3 File: CRR1170188_f1.fq.gz
File: CRR1170188_r2.fq.gz
CRX1077249 RNAseq_fruit_PFD_30d_pulp Durio zibethinus Illumina HiSeq 2000 SAMC3768470
Run编号 Run别名 Run序列文件信息
CRR1170183 run_RNAseq_fruit_PFD_30d_pulp_1 File: CRR1170183_f1.fq.gz
File: CRR1170183_r2.fq.gz
CRR1170184 run_RNAseq_fruit_PFD_30d_pulp_2 File: CRR1170184_f1.fq.gz
File: CRR1170184_r2.fq.gz
CRR1170185 run_RNAseq_fruit_PFD_30d_pulp_3 File: CRR1170185_f1.fq.gz
File: CRR1170185_r2.fq.gz
CRX1077248 RNAseq_fruit_PFD_7d Durio zibethinus Illumina HiSeq 2000 SAMC3768469
Run编号 Run别名 Run序列文件信息
CRR1170180 run_RNAseq_fruit_PFD_7d_1 File: CRR1170180_f1.fq.gz
File: CRR1170180_r2.fq.gz
CRR1170181 run_RNAseq_fruit_PFD_7d_2 File: CRR1170181_f1.fq.gz
File: CRR1170181_r2.fq.gz
CRR1170182 run_RNAseq_fruit_PFD_7d_3 File: CRR1170182_f1.fq.gz
File: CRR1170182_r2.fq.gz
CRX1077247 RNAseq_seed Durio zibethinus Illumina HiSeq 2000 SAMC3768468
Run编号 Run别名 Run序列文件信息
CRR1170177 run_RNAseq_seed_1 File: CRR1170177_f1.fq.gz
File: CRR1170177_r2.fq.gz
CRR1170178 run_RNAseq_seed_2 File: CRR1170178_f1.fq.gz
File: CRR1170178_r2.fq.gz
CRR1170179 run_RNAseq_seed_3 File: CRR1170179_f1.fq.gz
File: CRR1170179_r2.fq.gz
CRX1077246 RNAseq_flower Durio zibethinus Illumina HiSeq 2000 SAMC3768467
Run编号 Run别名 Run序列文件信息
CRR1170174 run_RNAseq_flower_1 File: CRR1170174_f1.fq.gz
File: CRR1170174_r2.fq.gz
CRR1170175 run_RNAseq_flower_2 File: CRR1170175_f1.fq.gz
File: CRR1170175_r2.fq.gz
CRR1170176 run_RNAseq_flower_3 File: CRR1170176_f1.fq.gz
File: CRR1170176_r2.fq.gz
CRX1077245 RNAseq_leaf Durio zibethinus Illumina HiSeq 2000 SAMC3768465
Run编号 Run别名 Run序列文件信息
CRR1170171 run_RNAseq_leaf_1 File: CRR1170171_f1.fq.gz
File: CRR1170171_r2.fq.gz
CRR1170172 run_RNAseq_leaf_2 File: CRR1170172_f1.fq.gz
File: CRR1170172_r2.fq.gz
CRR1170173 run_RNAseq_leaf_3 File: CRR1170173_f1.fq.gz
File: CRR1170173_r2.fq.gz
CRX1077244 RNAseq_stem Durio zibethinus Illumina HiSeq 2000 SAMC3768466
Run编号 Run别名 Run序列文件信息
CRR1170168 run_RNAseq_stem_1 File: CRR1170168_f1.fq.gz
File: CRR1170168_r2.fq.gz
CRR1170169 run_RNAseq_stem_2 File: CRR1170169_f1.fq.gz
File: CRR1170169_r2.fq.gz
CRR1170170 run_RNAseq_stem_3 File: CRR1170170_f1.fq.gz
File: CRR1170170_r2.fq.gz
CRX1077243 WGS_HiC Durio zibethinus Illumina HiSeq 2000 SAMC3768465
Run编号 Run别名 Run序列文件信息
CRR1170167 run_WGS_HiC File: CRR1170167_f1.fq.gz
File: CRR1170167_r2.fq.gz
提交者:XiaoHao Ji (jixiaohao2006@163.com)
所属单位:Research Institute of Pomology, Chinese Academy of Agricultural Sciences
提交日期:2024-05-28