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实验基本信息
实验编号 CRX1238535
物种名称 Gentiana straminea
标题 Gs-Root-1_1
项目编号 PRJCA030859
样本编号 SAMC4286147
测序平台 Illumina HiSeq 4000
建库信息
文库名称 文库构建方法 建库策略 样品来源 实验选择 文库布局
Total RNA was extracted using Trizol reagent kit according to the manufacturer’s protocol. RNA quality was assessed on an Agilent 2100 Bioanalyzer and checked using RNase free agarose gel electrophoresis. After total RNA was extracted, mRNA was enriched by Oligo(dT) beads, Then the enriched mRNA was fragmented into short fragments using fragmentation buffer and reverse transcribed into cDNA with random primers. Second-strand cDNA was synthesized by DNA polymerase I, RNase H, dNTP and buffer. Then the cDNA fragments were purified with QiaQuick PCR extraction kit, end repaired, poly(A) added, and ligated to Illumina sequencing adapters. The ligation products were size selected by agarose gel electrophoresis, PCR amplified, and sequenced using Illumina HiSeq TM 4000 RNA-Seq TRANSCRIPTOMIC PolyA PAIRED
处理信息 Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
发布日期2025-01-21
测序反应
Run编号 Run序列文件信息
File nameFile size (MB)
CRR1352608 CRR1352608_r1.fq.gz
CRR1352608_r2.fq.gz
1,451.59
1,469.69
提交者Yang lina (yanglinaqhu521@126.com)
所属单位Qinghai University
提交日期2024-10-27