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实验基本信息
实验编号 CRX1298580
物种名称 Lilium davidii
标题 KZ-2
项目编号 PRJCA033382
样本编号 SAMC4458287
测序平台 DNBSEQ-T7
建库信息
文库名称 文库构建方法 建库策略 样品来源 实验选择 文库布局
Oligo(dT) attached magnetic beads were used to purifed mRNA from bulbs of Lilium in three replicates by eliminating rRNA and tRNA in a total amount of 2 μg RNA per sample. Purifed mRNA was fragmented into small pieces with fragment bufer at appropriate temperature. Then, First-strand cDNA was generated by random hexamer-primed reverse transcription, followed by a second-strand cDNA synthesis. Afer that, RNA Index Adapters and A-Tailing Mix were added by incubating to end repair. The fragments of cDNA obtained from previous steps were amplifed by PCR, and the PCR products were purifed by Ampure XP Beads, and dissolved in EB solution. Te products were validated on the Agilent Technologies 2100 bioanalyzer for quality control. The double stranded PCR products obtained from previous steps were denatured by heating and circularized by the splint oligo sequence to get the fnal library, and the single stranded circular DNA (ssCir DNA) was formatted as the fnal library. RNA-Seq TRANSCRIPTOMIC PCR PAIRED
处理信息 Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Insert size (bp): 200
发布日期2024-12-11
测序反应
Run编号 Run序列文件信息
File nameFile size (MB)
CRR1414959 CRR1414959_r1.fq.gz
CRR1414959_r2.fq.gz
2,621.42
2,634.95
提交者Junlan Zeng (zengjunlan@email.swu.edu.cn)
所属单位Southwest University
提交日期2024-12-10