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实验基本信息
实验编号 CRX1577659
物种名称 soil metagenome
标题 JL228
项目编号 PRJCA037841
样本编号 SAMC4915460
测序平台 Illumina HiSeq 4000
建库信息
文库名称 文库构建方法 建库策略 样品来源 实验选择 文库布局
DNA purity and integrity were analyzed using agarose gel electrophoresis. The DNA concentration was precisely quantified using a Qubit instrument. Qualified DNA samples were randomly fragmented into approximately 350 bp fragments using a Covaris ultrasonicator. Subsequently, the fragmented DNA underwent end repair, A-tailing, sequencing adapter ligation, purification, and PCR amplification to complete the library preparation. Following library construction, initial quantification was performed using a Qubit 2.0, and the library was diluted to a concentration of 2 ng/μl. The insert size of the library was then determined using an Agilent 2100, and once it met the expected size range, the library’s effective concentration was accurately quantified using Q-PCR (library effective concentration > 3 nM). After passing library quality control, different libraries were pooled based on their effective concentrations and the desired data output for Illumina PE150 sequencing. OTHER METAGENOMIC PCR PAIRED
处理信息 Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
发布日期2025-03-28
测序反应
Run编号 Run序列文件信息
File nameFile size (MB)
CRR1704860 CRR1704860_r1.fq.gz
CRR1704860_r2.fq.gz
6,793.87
7,185.16
提交者Shenghao Liu (shliu@fio.org.cn)
所属单位First Institute of Oceanography, Ministry of Natural Resources
提交日期2025-03-27