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CRA028360 基本信息
标题: low-coverage whole genome sequencing of cervical microbiota
项目编号: PRJCA041150 /
发布日期: 2025-09-20
文件个数: 100
文件大小: 2.91 GB
出版信息
杂志名称
Microbiology Spectrum
发表年份
2025
Doi
10.1128/spectrum.03206-24
PubMed ID
41059691

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元数据信息:
文件:
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Experiments和Runs信息
实验编号 实验名称 物种名称 测序平台 样本编号
CRX1876926 Cervicitis-associated microbiome WGS (host-depleted) - Patient50 human vaginal metagenome Illumina HiSeq X Ten SAMC5719547
Run编号 Run别名 Run序列文件信息
CRR2017997 Low-coverage WGS of cervical microbiota: Cervical cancer_Patient005 File: CRR2017997_r1.fastq.gz
File: CRR2017997_r2.fastq.gz
CRX1876925 Cervicitis-associated microbiome WGS (host-depleted) - Patient49 human vaginal metagenome Illumina HiSeq X Ten SAMC5719546
Run编号 Run别名 Run序列文件信息
CRR2017996 Low-coverage WGS of cervical microbiota: Cervical cancer_Patient004 File: CRR2017996_r1.fastq.gz
File: CRR2017996_r2.fastq.gz
CRX1876924 Cervicitis-associated microbiome WGS (host-depleted) - Patient48 human vaginal metagenome Illumina HiSeq X Ten SAMC5719545
Run编号 Run别名 Run序列文件信息
CRR2017995 Low-coverage WGS of cervical microbiota: Cervical cancer_Patient003 File: CRR2017995_r1.fastq.gz
File: CRR2017995_r2.fastq.gz
CRX1876923 Cervicitis-associated microbiome WGS (host-depleted) - Patient47 human vaginal metagenome Illumina HiSeq X Ten SAMC5719544
Run编号 Run别名 Run序列文件信息
CRR2017994 Low-coverage WGS of cervical microbiota: Cervical cancer_Patient002 File: CRR2017994_r1.fastq.gz
File: CRR2017994_r2.fastq.gz
CRX1876922 Cervicitis-associated microbiome WGS (host-depleted) - Patient46 human vaginal metagenome Illumina HiSeq X Ten SAMC5719543
Run编号 Run别名 Run序列文件信息
CRR2017993 Low-coverage WGS of cervical microbiota: Cervical cancer_Patient001 File: CRR2017993_r1.fastq.gz
File: CRR2017993_r2.fastq.gz
CRX1876921 Cervicitis-associated microbiome WGS (host-depleted) - Patient45 human vaginal metagenome Illumina HiSeq X Ten SAMC5719542
Run编号 Run别名 Run序列文件信息
CRR2017992 Low-coverage WGS of cervical microbiota: CIN_Patient037 File: CRR2017992_r1.fastq.gz
File: CRR2017992_r2.fastq.gz
CRX1876920 Cervicitis-associated microbiome WGS (host-depleted) - Patient44 human vaginal metagenome Illumina HiSeq X Ten SAMC5719541
Run编号 Run别名 Run序列文件信息
CRR2017991 Low-coverage WGS of cervical microbiota: CIN_Patient036 File: CRR2017991_r1.fastq.gz
File: CRR2017991_r2.fastq.gz
CRX1876919 Cervicitis-associated microbiome WGS (host-depleted) - Patient43 human vaginal metagenome Illumina HiSeq X Ten SAMC5719540
Run编号 Run别名 Run序列文件信息
CRR2017990 Low-coverage WGS of cervical microbiota: CIN_Patient035 File: CRR2017990_r1.fastq.gz
File: CRR2017990_r2.fastq.gz
CRX1876918 Cervicitis-associated microbiome WGS (host-depleted) - Patient42 human vaginal metagenome Illumina HiSeq X Ten SAMC5719539
Run编号 Run别名 Run序列文件信息
CRR2017989 Low-coverage WGS of cervical microbiota: CIN_Patient034 File: CRR2017989_r1.fastq.gz
File: CRR2017989_r2.fastq.gz
CRX1876917 Cervicitis-associated microbiome WGS (host-depleted) - Patient41 human vaginal metagenome Illumina HiSeq X Ten SAMC5719538
Run编号 Run别名 Run序列文件信息
CRR2017988 Low-coverage WGS of cervical microbiota: CIN_Patient033 File: CRR2017988_r1.fastq.gz
File: CRR2017988_r2.fastq.gz
CRX1876916 Cervicitis-associated microbiome WGS (host-depleted) - Patient40 human vaginal metagenome Illumina HiSeq X Ten SAMC5719537
Run编号 Run别名 Run序列文件信息
CRR2017987 Low-coverage WGS of cervical microbiota: CIN_Patient032 File: CRR2017987_r1.fastq.gz
File: CRR2017987_r2.fastq.gz
CRX1876915 Cervicitis-associated microbiome WGS (host-depleted) - Patient39 human vaginal metagenome Illumina HiSeq X Ten SAMC5719536
Run编号 Run别名 Run序列文件信息
CRR2017986 Low-coverage WGS of cervical microbiota: CIN_Patient031 File: CRR2017986_r1.fastq.gz
File: CRR2017986_r2.fastq.gz
CRX1876914 Cervicitis-associated microbiome WGS (host-depleted) - Patient38 human vaginal metagenome Illumina HiSeq X Ten SAMC5719535
Run编号 Run别名 Run序列文件信息
CRR2017985 Low-coverage WGS of cervical microbiota: CIN_Patient030 File: CRR2017985_r1.fastq.gz
File: CRR2017985_r2.fastq.gz
CRX1876913 Cervicitis-associated microbiome WGS (host-depleted) - Patient37 human vaginal metagenome Illumina HiSeq X Ten SAMC5719534
Run编号 Run别名 Run序列文件信息
CRR2017984 Low-coverage WGS of cervical microbiota: CIN_Patient029 File: CRR2017984_r1.fastq.gz
File: CRR2017984_r2.fastq.gz
CRX1876912 Cervicitis-associated microbiome WGS (host-depleted) - Patient36 human vaginal metagenome Illumina HiSeq X Ten SAMC5719533
Run编号 Run别名 Run序列文件信息
CRR2017983 Low-coverage WGS of cervical microbiota: CIN_Patient028 File: CRR2017983_r1.fastq.gz
File: CRR2017983_r2.fastq.gz
CRX1876911 Cervicitis-associated microbiome WGS (host-depleted) - Patient35 human vaginal metagenome Illumina HiSeq X Ten SAMC5719532
Run编号 Run别名 Run序列文件信息
CRR2017982 Low-coverage WGS of cervical microbiota: CIN_Patient027 File: CRR2017982_r1.fastq.gz
File: CRR2017982_r2.fastq.gz
CRX1876910 Cervicitis-associated microbiome WGS (host-depleted) - Patient34 human vaginal metagenome Illumina HiSeq X Ten SAMC5719531
Run编号 Run别名 Run序列文件信息
CRR2017981 Low-coverage WGS of cervical microbiota: CIN_Patient026 File: CRR2017981_r1.fastq.gz
File: CRR2017981_r2.fastq.gz
CRX1876909 Cervicitis-associated microbiome WGS (host-depleted) - Patient33 human vaginal metagenome Illumina HiSeq X Ten SAMC5719530
Run编号 Run别名 Run序列文件信息
CRR2017980 Low-coverage WGS of cervical microbiota: CIN_Patient025 File: CRR2017980_r1.fastq.gz
File: CRR2017980_r2.fastq.gz
CRX1876908 Cervicitis-associated microbiome WGS (host-depleted) - Patient32 human vaginal metagenome Illumina HiSeq X Ten SAMC5719529
Run编号 Run别名 Run序列文件信息
CRR2017979 Low-coverage WGS of cervical microbiota: CIN_Patient024 File: CRR2017979_r1.fastq.gz
File: CRR2017979_r2.fastq.gz
CRX1876907 Cervicitis-associated microbiome WGS (host-depleted) - Patient31 human vaginal metagenome Illumina HiSeq X Ten SAMC5719528
Run编号 Run别名 Run序列文件信息
CRR2017978 Low-coverage WGS of cervical microbiota: CIN_Patient023 File: CRR2017978_r1.fastq.gz
File: CRR2017978_r2.fastq.gz
提交者:Tingting Zhang (z15733176635@163.com)
所属单位:Beijing Children's Hospital, Capital Medical University
提交日期:2025-07-27