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实验基本信息
实验编号 CRX2619170
物种名称 Mus musculus
标题 Control-3_scRNAseq
项目编号 PRJCA058617
样本编号 SAMC7204388
测序平台 Illumina NovaSeq 6000
建库信息
文库名称 文库构建方法 建库策略 样品来源 实验选择 文库布局
Testes were harvested from 6-week-old male C57 mice from the control and Ara-C-treated groups and immediately processed to generate single-cell suspensions. Briefly, testicular tissues were finely minced and enzymatically digested to dissociate cells. The digested tissues were filtered through a 40-um cell strainer to obtain a uniform single-cell suspension. After centrifugation and washing, cells were resuspended in PBS containing 0.04% BSA. Cell number and viability were determined before loading onto the single-cell platform. Single-cell 3' RNA-seq libraries were prepared using the 10x Genomics Chromium platform following the manufacturer's instructions. Individual cells were partitioned into GEMs with barcoded beads, enabling transcript labeling with cell-specific barcodes and UMIs during reverse transcription. After cDNA amplification, sequencing libraries were prepared and sequenced on the Illumina NovaSeq 6000 platform. RNA-Seq TRANSCRIPTOMIC SINGLE CELL RANDOM PAIRED
处理信息 Planned read length (bp) for mate 1: 28
Planned read length (bp) for mate 2: 91
Insert size (bp): 470
Nominal size (bp): 470
发布日期2026-03-16
测序反应
Run编号 Run序列文件信息
File nameFile size (MB)
CRR2797499 CRR2797499_r1.fastq.gz
CRR2797499_r2.fastq.gz
42,302.86
35,334.16
提交者siyu xia (syxbestmayer@whu.edu.cn)
所属单位Dongguan Maternal and Child Health Care Hospital
提交日期2026-03-14
关联实验
Experiments(5)