Scientific Name
Severe acute respiratory syndrome coronavirus 2
Common Names
-
Bioproject
PRJCA004109
Biosample
SAMC299942
Accession No.
GWHAZIQ01000000
GWH reannotation accession
-
GSA raw reads
-
GVM variations of the species
16,114 (SNP), 820 (Indel)
Submitter Organization
Jamil-ur-Rahman Center for Genome Research, Dr. Panjwani Center for Molecular Medicine and Drug Research, ICCBS, University of Karachi
Contact
Ishtiaq Khan, ishtiaqchemist@gmail.com
Sequence author(s)
Muhammad Shakeel, Muhammad Irfan, Zaibun Nisa, Muhammad Rashid, Sabeeta Ansari, Ishtiaq Khan
Released Date
2020-12-28
Assembly Level
Draft genome in chromosome level
Genome Representation
Full Genome
Assembly method
Velvet 1.0.0
Sequencing & coverage
Illumina MiSeq 88.87
Download
DNA
Publication(s)
-
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHAZIQ01000000 - JRCGR-KHI25 Draft genome in chromosome level 2020-12-28 DNA

Statistics of Genome Assembly

Genome size (bp) 29,172
GC content 38.06%
Genome sequence No. 1
Maximum genome sequence length (bp) 29,172
Minimum genome sequence length (bp) 29,172
Average genome sequence length (bp) 29,172
Genome sequence N50 (bp) 29,172
Genome sequence N90 (bp) 29,172