- Scientific Name
- Severe acute respiratory syndrome coronavirus 2
- Common Names
- -
- Bioproject
- PRJCA004109
- Biosample
- SAMC299938
- Accession No.
- GWHAZIU01000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 16,114 (SNP), 820 (Indel)
- Submitter Organization
- Jamil-ur-Rahman Center for Genome Research, Dr. Panjwani Center for Molecular Medicine and Drug Research, ICCBS, University of Karachi
- Contact
- Ishtiaq Khan, ishtiaqchemist@gmail.com
- Sequence author(s)
- Muhammad Shakeel, Muhammad Irfan, Zaibun Nisa, Muhammad Rashid, Sabeeta Ansari, Ishtiaq Khan
- Released Date
- 2020-12-29
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Velvet 1.0.0
- Sequencing & coverage
- Illumina MiSeq 95.258
- Download
-
DNA
GFF
RNA
Protein
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 28,965 |
| GC content | 37.83% |
| Genome sequence No. | 1 |
| Maximum genome sequence length (bp) | 28,965 |
| Minimum genome sequence length (bp) | 28,965 |
| Average genome sequence length (bp) | 28,965 |
| Genome sequence N50 (bp) | 28,965 |
| Genome sequence N90 (bp) | 28,965 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 10 | 10 |