- Scientific Name
- Pseudocohnilembus persalinus
- Common Names
- -
- Bioproject
- PRJCA003485
- Biosample
- SAMC247146
- Accession No.
- GWHAZTY00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR188770
- GVM variations of the species
- -
- Submitter Organization
- Center for Molecular and Cellular Biology of Aquatic Organisms, Institute of Hydrobiology, Chinese Academy of Sciences
- Contact
- Kai Chen, chenkai@ihb.ac.cn
- Sequence author(s)
- Wei Miao
- Released Date
- 2023-09-17
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- SOAPdenovo 2.04
- Sequencing & coverage
- Illumina HiSeq 2000 100.0
- Download
-
DNA
- Publication(s)
- Jie Xiong, et al. Genome of the facultative scuticociliatosis pathogen Pseudocohnilembus persalinus provides insight into its virulence through horizontal gene transfer. Scientific Reports. 2015, 5: 15470.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHAZTY00000000 | - | Pseudocohnilembus persalinus genome | Draft genome in scaffold level | 2023-09-17 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 55,455,357 |
| GC content | 18.81% |
| Scaffold sequence No. | 288 |
| Maximum scaffold sequence length (bp) | 1,988,609 |
| Minimum scaffold sequence length (bp) | 1,005 |
| Average scaffold sequence length (bp) | 192,553 |
| Scaffold N50 (bp) | 367,841 |
| Scaffold N90 (bp) | 104,806 |