- Scientific Name
- Severe acute respiratory syndrome coronavirus 2
- Common Names
- -
- Bioproject
- PRJCA005693
- Biosample
- SAMC399939
- Accession No.
- GWHBDHD00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR302351
- GVM variations of the species
- 16,114 (SNP), 820 (Indel)
- Submitter Organization
- Department of Infectious Diseases, Southwest Hospital
- Contact
- Fengming Sun, bio_sunfm@sina.com
- Sequence author(s)
- Fengming Sun
- Released Date
- 2021-07-21
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Partial Genome
- Assembly method
- SMRT Link ccs v7.0.1
- Sequencing & coverage
- PacBio Sequel 5.0
- Download
-
DNA
- Publication(s) -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBDHD00000000 | - | SG2-0131-SP_CCS | Draft genome in contig level | 2021-07-21 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 163,908,476 |
| GC content | 37.22% |
| Contig sequence No. | 39,991 |
| Maximum contig sequence length (bp) | 8,558 |
| Minimum contig sequence length (bp) | 3,548 |
| Average contig sequence length (bp) | 4,099 |
| Contig N50 (bp) | 4,068 |
| Contig N90 (bp) | 4,065 |